DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3927 and how

DIOPT Version :10

Sequence 1:NP_611681.1 Gene:CG3927 / 37576 FlyBaseID:FBgn0034739 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_001238186.2 Gene:how / 4577936 VectorBaseID:AGAMI1_006092 Length:378 Species:Anopheles gambiae


Alignment Length:279 Identity:86/279 - (30%)
Similarity:136/279 - (48%) Gaps:56/279 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCAL----LIDESVDRV-YSTGRIPG-- 66
            ::|.|.||..|.....:|. :||.|..:||:|:| ||...|    |:||.:.:| .|...|.|  
Mosquito    31 QQQQQQQPNQQQSTQSIAD-YLAQLLKDRKQLAA-FPNVFLHIERLLDEEISKVRASLFHINGVT 93

  Fly    67 KEPFADVYQQKP------MKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGR 125
            |||.     |.|      :.:.:||:|||.::|.|||.|:||||:|.:.::|::||.|||:::|:
Mosquito    94 KEPL-----QLPDPEGESVTLNEKVYVPVKEYPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGK 153

  Fly   126 NSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIP--DDNDDV 188
            .||||:.||:..|  |.|.:.||..||.:.::..........::..||.|::|.|:|  :..|::
Mosquito   154 GSMRDKKKEDANR--GKPNWEHLSDDLHVLITVEDTENRATIKLKRALDEVKKLLVPHAEGEDEL 216

  Fly   189 WHEQQRELMEM----------NPKSAKKSNGLNMAPYRSNFDK------------------AIGA 225
               ::|:|||:          ..|.|...|..:..|.:...|:                  ::.|
Mosquito   217 ---KKRQLMELAIINGTYRDSTTKVAPADNTFSFDPQQYTDDRWKMAAAASAADQRMLTQASLAA 278

  Fly   226 IRNRAPKYNNQIRRVTENP 244
            ..|.|.. |....|...||
Mosquito   279 AANLAAA-NQMAGRTAPNP 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3927NP_611681.1 KH-I_KHDRBS 77..178 CDD:411812 39/106 (37%)
howXP_001238186.2 None

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