DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3927 and bpb1

DIOPT Version :10

Sequence 1:NP_611681.1 Gene:CG3927 / 37576 FlyBaseID:FBgn0034739 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_587871.1 Gene:bpb1 / 2538832 PomBaseID:SPCC962.06C Length:587 Species:Schizosaccharomyces pombe


Alignment Length:200 Identity:52/200 - (26%)
Similarity:96/200 - (48%) Gaps:36/200 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EKQNQDQPTYQ---PRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPF 70
            |:.....|.|.   .|||....::...|:.||.|:              ::|...  .:||....
pombe   129 ERSPSPPPQYDNHGRRLNTREIRYKKKLEDERHRI--------------IERAMK--MVPGFRAP 177

  Fly    71 ADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEE 135
            :|  .::|.|..:||:|||..:|:.||.|.::||:|::|:.::.::..||.|:|:.|:    ||.
pombe   178 SD--YRRPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSV----KEG 236

  Fly   136 ELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYL-----IPDDNDDVWHEQQRE 195
            :.||....| .::.:||...|:     |:...:|.:|:..|...:     :|:..:|:...|.|:
pombe   237 KGRSDPSVR-GNMEEDLHCLVT-----ADSEDKINHAIKLIDNVIQTAASVPEGQNDLKRNQLRQ 295

  Fly   196 LMEMN 200
            |..:|
pombe   296 LATLN 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3927NP_611681.1 KH-I_KHDRBS 77..178 CDD:411812 32/100 (32%)
bpb1NP_587871.1 MSL5 17..306 CDD:227503 51/199 (26%)
AIR1 269..400 CDD:227414 6/31 (19%)
PHA03247 <387..581 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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