DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3927 and asd-2

DIOPT Version :10

Sequence 1:NP_611681.1 Gene:CG3927 / 37576 FlyBaseID:FBgn0034739 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001250340.1 Gene:asd-2 / 188703 WormBaseID:WBGene00006423 Length:486 Species:Caenorhabditis elegans


Alignment Length:230 Identity:70/230 - (30%)
Similarity:118/230 - (51%) Gaps:39/230 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 EVAQKFLADLDAERKRLSAEFP----LCALLIDESVDRV----------YSTGRIPGKEPFADVY 74
            :.:.::|:.|..::|:|:| ||    ....|.||.:::|          ..:..:|..|..:.|:
 Worm    97 QYSAEYLSQLLKDKKQLAA-FPNVFHHLERLADEEINKVRVVLFQCEFSKESAPLPDAEGDSTVH 160

  Fly    75 QQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRS 139
                   .:|||||..:.|.:||.|:||||:|.:.::|::||.|||:::||.||||:.|||..| 
 Worm   161 -------TEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSMRDKKKEELNR- 217

  Fly   140 SGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLI--PDDNDDVWHEQQRELMEMNPK 202
             |.|.:.||.::|.:.:...........::..|:.|:||.|:  |:..||:..:|..||..:|  
 Worm   218 -GKPNWEHLSEELHVLIQCEDTENRAKVKLMRAVEEVRKLLVPAPEGEDDLKRKQLMELAIIN-- 279

  Fly   203 SAKKSNGLNMAPYRSNFDK-AIGAIRNRAPKYNNQ 236
                      ..|||..|: |:.|.:..|.|:..|
 Worm   280 ----------GTYRSGTDQSALAAAQLAAVKHQQQ 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3927NP_611681.1 KH-I_KHDRBS 77..178 CDD:411812 37/100 (37%)
asd-2NP_001250340.1 STAR_dimer 95..145 CDD:435414 11/48 (23%)
KH-I_HOW 155..259 CDD:411894 41/112 (37%)

Return to query results.
Submit another query.