DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3927 and gld-1

DIOPT Version :10

Sequence 1:NP_611681.1 Gene:CG3927 / 37576 FlyBaseID:FBgn0034739 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_492143.1 Gene:gld-1 / 172532 WormBaseID:WBGene00001595 Length:463 Species:Caenorhabditis elegans


Alignment Length:236 Identity:71/236 - (30%)
Similarity:122/236 - (51%) Gaps:34/236 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KQNQDQPTYQPRLNEVAQ-----KFLADLDAERKRLSA---EFPLCALLIDESVDRV----YST- 61
            |.:.|:..:.|...|..:     ::||||..|:|.|:.   .|.....|:|:.:.||    :.| 
 Worm   125 KSSMDKSLFSPTATEPIEVEATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTE 189

  Fly    62 -GRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGR 125
             .|:...||..|:     :.|.:|::||.|::|.:||.|:||||:|.:.::|:::|.|||:::|:
 Worm   190 FPRVELPEPAGDM-----ISITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGK 249

  Fly   126 NSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLI--PDDNDDV 188
            .||||::||...|  |...:.||..||.:.|.........:.::..||.:::|.||  |:..|::
 Worm   250 GSMRDKSKESAHR--GKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDEL 312

  Fly   189 WHEQQRELMEMN--------PKSAKKSNG---LNMAPYRSN 218
            ..:|..||..:|        |..|:....   |:..|.||:
 Worm   313 KRKQLMELAIINGTYRPMKSPNPARVMTAVPLLSPTPLRSS 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3927NP_611681.1 KH-I_KHDRBS 77..178 CDD:411812 35/100 (35%)
gld-1NP_492143.1 STAR_dimer 146..190 CDD:435414 13/43 (30%)
KH-I_Hqk_like 204..304 CDD:411811 37/101 (37%)

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