DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3927 and khdrbs3

DIOPT Version :10

Sequence 1:NP_611681.1 Gene:CG3927 / 37576 FlyBaseID:FBgn0034739 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_073787504.1 Gene:khdrbs3 / 101867535 ZFINID:ZDB-GENE-130530-892 Length:342 Species:Danio rerio


Alignment Length:205 Identity:92/205 - (44%)
Similarity:126/205 - (61%) Gaps:3/205 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNK 91
            :|:|.:|.||:..|...|.....|:|:.:::| ........|.|.||...|.||:.|||.:||.:
Zfish     4 EKYLPELMAEKDSLDPSFQHSMRLLDQEIEKV-QKDEDKEDEKFIDVVINKNMKLGQKVLIPVKQ 67

  Fly    92 FPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEV 156
            ||||||.||:|||:||||:||||:|..|:.|.|:.||||:.||||||.||:.:|.||::||.:.:
Zfish    68 FPKFNFVGKLLGPRGNSLKRLQEDTLTKMSILGKGSMRDKEKEEELRKSGETKYHHLNEDLHVLI 132

  Fly   157 SAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMN--PKSAKKSNGLNMAPYRSNF 219
            ...|||||.|||:.:||.||:|:||||.||::...|.:||..:|  .:.||..........|...
Zfish   133 EVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSEDAKVPAARGKTTTRGRG 197

  Fly   220 DKAIGAIRNR 229
            ..|.|..|.|
Zfish   198 TSAPGTHRTR 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3927NP_611681.1 KH-I_KHDRBS 77..178 CDD:411812 60/100 (60%)
khdrbs3XP_073787504.1 None

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