Protein Alignment CG3927 and khdrbs3

DIOPT Version :10

• Sequence 1: NP_611681.1
• Gene: CG3927 / 37576
• FlyBaseID: FBgn0034739
• Length: 270
• Species: Drosophila melanogaster
• Sequence 2: XP_002932263.1
• Gene: khdrbs3 / 100379996
• XenbaseID: XB-GENE-941483
• Length: 342
• Species: Xenopus tropicalis
• Alignment Length: 281
• Identity: 98/281 - (34%)
• Similarity: 144/281 - (51%)
• Gaps: 61/281 - (21%)

  Fly    27 QKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNK 91
            :|:|..|.||:..|...|.....::.|.:::: ..|....::.:.||...|.||:.|||.:|:.:
 Frog     2 EKYLPQLLAEKDALDPSFTHALRMVKEEIEKL-QKGEDNTEDQYIDVVINKNMKLAQKVLIPIKQ 65

  Fly    92 FPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEV 156
            ||||||.||:|||:||||:||||:|..|:.|.|:.||||:.||||||.||:.:|.||:.||.:.:
 Frog    66 FPKFNFVGKLLGPRGNSLKRLQEDTLTKMSILGKGSMRDKAKEEELRKSGEAKYYHLNDDLHVLI 130

  Fly   157 SAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMN--------------------- 200
            ...|||||.|||:.:||.||:|:||||.||::...|.:||..:|
 Frog   131 EVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGPETTEAPVVRGKPSIRARG 195

  Fly   201 --------------------PKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPR 245
                                |:.|....|  :.|.|.:..:|.|.:..||       |.:   |.
 Frog   196 VPVPALPRGRGGVPPAPTGVPRGAPAPRG--VTPARVSSARARGLVATRA-------RGI---PP 248

  Fly   246 EVAY-----MEEV--EYDYDE 259
            ...|     :::.  |||||:
 Frog   249 PAGYRPPPPVQDTYGEYDYDD 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3927	NP_611681.1	KH-I_KHDRBS	77..178	CDD:411812	59/100 (59%)
khdrbs3	XP_002932263.1	Qua1	3..52	CDD:465079	11/49 (22%)
		KH-I_KHDRBS3	47..159	CDD:411898	65/111 (59%)
		PHA03381	<193..>233	CDD:177618	5/41 (12%)
		Sam68-YY	262..316	CDD:465182	5/8 (63%)