DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and frmd7

DIOPT Version :10

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:XP_005173955.3 Gene:frmd7 / 751637 ZFINID:ZDB-GENE-060825-67 Length:675 Species:Danio rerio


Alignment Length:519 Identity:90/519 - (17%)
Similarity:161/519 - (31%) Gaps:178/519 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWINLRNRLSGDSGSSG 75
            ::...:.:.:..|::....||..:.:: |.||||||.    :....:..|:.|...|:.......
Zfish    32 SEHVFQMEQRVLGKDFFNSVCGHLKLV-EKEYFGLEF----RHHCGSYVWLELLKPLAKQIKRRN 91

  Fly    76 SGIQLMLALRVKFWVPVHFILQESV-RNLFYMQARRDLLEGRLTAPDWSGAAKLAALLCQADGLR 139
               .|:....|||:.|....||..| |.||.:|.::||..|.||..| :.||.|.:.|.||:...
Zfish    92 ---DLIFRFIVKFFPPDP
GELQREVTRYLFALQIKQDLSNGSLTCSD-NSAALLVSYLLQAEIGD 152

  Fly   140 FNESSLKADCPMRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKKRRLSKQKSMEHIEVCT 204
            |.|             ||                     :|:|:   :.:|....:.:.|.::  
Zfish   153 FIE-------------EL---------------------DKQHL---ENKRYIPNQDVLHKKI-- 178

  Fly   205 LPAASTTSCSLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSSSQTGLDERLASNP 269
                                                                             
Zfish   179 ----------------------------------------------------------------- 178

  Fly   270 LRVYEEYFMQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWLLKSIQDLEGYGEELFSGVT 334
            :|.::.:      .|:.||:                     |.:.||:..:.|:.||  :.....
Zfish   179 MRFHKRH------RGQSPAE---------------------ADHQLLEVSRKLDMYG--IRPHAA 214

  Fly   335 TNESATRCDIAVGAHGITVCRGGEK-QSIPFGAIAAAKSLRRTF--KLEYVDDHNDRKELEIKLP 396
            |:....|.::||...|:.|.:|..| .:..:..:......|:.|  ||......:.:..:|..:.
Zfish   215 TDGENMRINLAVTHCGVLVFQGNTKINTFSWANVRKLSFKRKHFLIKLHTTIVASCKDTVEFTMA 279

  Fly   397 KQPIAAGLYRSITERHAFY------------------VCDKVRGVVTNQ---FTRDLKGTIASMF 440
            .:.:....::...|.|.|:                  .|.:..|....|   ||:..:..|...|
Zfish   280 NRDVCKAFWKMCVEYHTFFRLSQEPKSKQKSLLYSRGSCFRYSGRTQKQLLDFTKKSEEKINLPF 344

  Fly   441 MENTELGKRYVFDIQHT--CREVHD---QARRTLHERGGDLVAEGAEGCSAVAGGLGASAVGEP 499
            |      ::|..|...|  ||...|   ...:..:|:.........:.|.:....|..|...:|
Zfish   345 M------RKYCKDYYDTRQCRSSPDLLTDVSKQAYEQSCGFPPPSGKRCQSAVEVLNTSEFQDP 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 Ubl1_cv_Nsp3_N-like 1..89 CDD:475130 16/77 (21%)
FERM_M 91..>148 CDD:459788 22/57 (39%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 23/133 (17%)
RING-HC_IAPs 545..583 CDD:438173
frmd7XP_005173955.3 FERM_F1_FRMD7 21..106 CDD:340708 18/81 (22%)
FERM_B-lobe 114..204 CDD:271216 31/221 (14%)
FERM_C_FARP1-like 199..319 CDD:270014 19/121 (16%)
FA 312..>347 CDD:462582 8/40 (20%)
Blue background indicates that the domain is not in the aligned region.

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