DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and mylipb

DIOPT Version :9

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001073491.1 Gene:mylipb / 565911 ZFINID:ZDB-GENE-061027-67 Length:464 Species:Danio rerio


Alignment Length:632 Identity:167/632 - (26%)
Similarity:250/632 - (39%) Gaps:187/632 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWCIVNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWINLRN 65
            |.|.:..|:.....|:.||||||::.|.|:|:.|.|| |::||||: :|..:.||   .|:||||
Zfish     1 MLCHITRPDSVVLEVEVDPKANGEDILNKICQKMGII-EVDYFGLQ-FTGTKGES---LWMNLRN 60

  Fly    66 RLSGDSGSSGSGIQLMLALRVKFWVPVHFILQESVRNLFYMQARRDLLEGRLTAPDWSGAAKLAA 130
            |:..:.....   ...|.|||||:|..|.||||..|:||.|..:.::::|.|.. |...|.:|.|
Zfish    61 RICQEVDCVS---PCRLRLRVKFFVEPHLILQEQTRHLFLMHVKEEIIKGSLRL-DAEQAIELCA 121

  Fly   131 LLCQADGLRFNESSLKADCPMRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKKRRLSKQK 195
            ||.||:...:.:::.|                                                 
Zfish   122 LLAQAEFGDYKQNTAK------------------------------------------------- 137

  Fly   196 SMEHIEVCTLPAASTTSCSLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSSSQTG 260
                  .|                                                         
Zfish   138 ------YC--------------------------------------------------------- 139

  Fly   261 LDERLASNPLRVYEEYFMQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWLLKSIQDLEGY 325
                        |.:.:.|     :|..|.:..|:::|..|.  .:|..:|:|..|:.:..|..|
Zfish   140 ------------YSQIYGQ-----DPSHDTINTISLKHKSLE--GVSQASAEYQALQLVSSLTYY 185

  Fly   326 GEELFSGVTTNESATRCDIAVGAHGITVCRGG----EKQSIPFGAIAAAKSLRRTFKLEYVDDHN 386
            |.|..  ...:....:..|.||..|:.||:..    |:...|  .|..|....|...:....|:.
Zfish   186 GVEWH--FARDSEGQQLLIGVGQEGLFVCKSDFTPIERLMYP--VIQMATQSGRNVYVTITKDNG 246

  Fly   387 DRKELEIKLPKQPIAAGLYRSITERHAFYVCDKVRGVVTNQFTRDLKGTIASMFM-ENTELGKRY 450
            |...|..|......|.||||:|||.||||.||.|...|..|::||.||.:||:|: |:.:|||||
Zfish   247 DSVVLLFKFVSPSAANGLYRAITEIHAFYRCDTVMSTVKMQYSRDFKGHLASLFLNESIDLGKRY 311

  Fly   451 VFDIQHTCREVHDQARRTLHERGGDLVAEGAEGCSAVAGGLGASAVGEPGVSPWAMALTTGAGGS 515
            :||||.|.:||:|:.||.|...|                    .:|...|:|...:..|      
Zfish   312 IFDIQRTSKEVYDRTRRALFNAG--------------------VSVNGRGISRSLLRQT------ 350

  Fly   516 MAGKIDLAIREK----EAREAAIERCVDTRISEAMQCKICMDRAINTVFNPCCHVIACAQCAARC 576
               |:|   ||:    :.||..:.:....|:.||:.|.:|.::.|:..|.||.|:..|..||::.
Zfish   351 ---KVD---REERMCVDCRETHVLKEKLQRLQEALTCALCCEQEISAAFCPCGHMFCCYNCASQL 409

  Fly   577 SNCPNCRVKITSVVKIYLPPELRTSQTGSGATTTSSSSIMGDGQVEE 623
            ..||.||.::..|..:|||  ...|..|.....|::|.:...|..|:
Zfish   410 QCCPVCRSEVDRVQHVYLP--TCASLLGLAEAKTTNSVLRRTGISED 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 B41 3..>143 CDD:214604 55/139 (40%)
FERM_N 5..67 CDD:286467 27/61 (44%)
FERM_M 93..>143 CDD:278785 19/49 (39%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 38/113 (34%)
zf-C3HC4_3 544..589 CDD:290631 16/44 (36%)
mylipbNP_001073491.1 B41 3..190 CDD:214604 72/326 (22%)
FERM_N 5..68 CDD:286467 28/67 (42%)
FERM_M 85..190 CDD:278785 36/236 (15%)
FERM_C_MYLIP_IDOL 185..295 CDD:270016 38/113 (34%)
zf-C3HC4_3 377..422 CDD:290631 16/44 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586519
Domainoid 1 1.000 104 1.000 Domainoid score I6652
eggNOG 1 0.900 - - E1_28NMI
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 246 1.000 Inparanoid score I3258
OMA 1 1.010 - - QHG50100
OrthoDB 1 1.010 - - D1340284at2759
OrthoFinder 1 1.000 - - FOG0005564
OrthoInspector 1 1.000 - - otm24863
orthoMCL 1 0.900 - - OOG6_108913
Panther 1 1.100 - - O PTHR23280
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.770

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