DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and mylip

DIOPT Version :9

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001017059.2 Gene:mylip / 549813 XenbaseID:XB-GENE-949814 Length:445 Species:Xenopus tropicalis


Alignment Length:603 Identity:166/603 - (27%)
Similarity:247/603 - (40%) Gaps:177/603 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWCIVNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWINLRN 65
            |.|.|..|:.....|:.|.||||::||.:||:.:.|| |.:||||: ::.|:.|:   .|:||||
 Frog     1 MLCYVTRPDAVVMEVEVDAKANGEDCLNQVCKRLGII-EGDYFGLQ-FSGNKGEN---LWLNLRN 60

  Fly    66 RLSGDSGSSGSGI-QLMLALRVKFWVPVHFILQESVRNLFYMQARRDLLEGRLTAPDWSGAAKLA 129
            |:|    ....|: ...|.|:|||:|..|.||||..|::|::..:.|||.|||.... :.|.:|:
 Frog    61 RIS----QQMDGLAPFRLKLKVKFFVEPHLILQEQTRHMFFLHIKEDLLAGRLQCSP-AQAVELS 120

  Fly   130 ALLCQADGLRFNESSLKADCPMRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKKRRLSKQ 194
            |||.|                                                            
 Frog   121 ALLAQ------------------------------------------------------------ 125

  Fly   195 KSMEHIEVCTLPAASTTSCSLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSSSQT 259
              ||:                               ...|.:|:.                    
 Frog   126 --MEY-------------------------------GDYSVNTAT-------------------- 137

  Fly   260 GLDERLASNPLRVYEEYFMQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWLLKSIQDLEG 324
                            |.:|..|..:.....|..|..:|..|..|  |..:.:|..|:.:..||.
 Frog   138 ----------------YSLQDLCGKDIDTAALESIIAKHKSLEGL--SQASGEYQFLQIVSTLEN 184

  Fly   325 YGEELFSGVTTNESATRCDIAVGAHGITVCRGGEKQS----IPFGAIAAAKSLRRTFKLEYVDDH 385
            ||.|..|  ..:....:..:.:|..||::|:  |..|    |.:..|..|....:...|....:.
 Frog   185 YGVEWHS--VRDAEGQKLIVGIGPEGISLCK--EDFSPINRITYPVIQMATQSGKNVYLTITKES 245

  Fly   386 NDRKELEIKLPKQPIAAGLYRSITERHAFYVCDKVRGVVTNQFTRDLKGTIASMFM-ENTELGKR 449
            .:...|..|:.....|:||||:|||.||||.||.|...|..|::|||||.:||.|: :|..:||:
 Frog   246 GNSLVLLFKVVSTRAASGLYRAITETHAFYRCDTVTNAVMMQYSRDLKGHLASFFLNDNINVGKK 310

  Fly   450 YVFDIQHTCREVHDQARRTLHERG-GDLVAEGAEGCSAVAGGLGASAVGEPGVSPWAMALTTGAG 513
            |||||:.|.:||:|.|||.|:..| .|||:           |.|.|   ||. ||    |.|...
 Frog   311 YVFDIRRTSKEVYDHARRALYNAGIVDLVS-----------GSGHS---EPS-SP----LKTSES 356

  Fly   514 GSMAGKID-LAIREKEAREAAIERCVDTRISEAMQCKICMDRAINTVFNPCCHVIACAQCAARCS 577
            .......: |:.::.:|.:..:.     ::.|||.|.:|.:..||:.|.||.|::.|..||.:..
 Frog   357 NMNCNSCESLSCQQTKALQEKLR-----KLKEAMLCMLCCEEEINSAFCPCGHMVCCEGCATQLQ 416

  Fly   578 NCPNCRVKITSVVKIYLP 595
            :||.||..:..|..::||
 Frog   417 SCPVCRASVEHVQHVFLP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 B41 3..>143 CDD:214604 55/140 (39%)
FERM_N 5..67 CDD:286467 26/61 (43%)
FERM_M 93..>143 CDD:278785 19/49 (39%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 37/113 (33%)
zf-C3HC4_3 544..589 CDD:290631 18/44 (41%)
mylipNP_001017059.2 FERM_F1_MYLIP 1..81 CDD:340624 35/88 (40%)
B41 5..190 CDD:214604 74/325 (23%)
FERM_C_MYLIP_IDOL 185..295 CDD:270016 37/113 (33%)
RING-HC_MYLIP 386..423 CDD:319437 14/36 (39%)
RING-HC finger (C3HC4-type) 387..421 CDD:319437 13/33 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11298
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8309
Inparanoid 1 1.050 239 1.000 Inparanoid score I3274
OMA 1 1.010 - - QHG50100
OrthoDB 1 1.010 - - D1340284at2759
OrthoFinder 1 1.000 - - FOG0005564
OrthoInspector 1 1.000 - - oto104044
Panther 1 1.100 - - LDO PTHR23280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5236
SonicParanoid 1 1.000 - - X5201
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.110

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