DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and birc2

DIOPT Version :9

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001005449.1 Gene:birc2 / 448041 XenbaseID:XB-GENE-966171 Length:604 Species:Xenopus tropicalis


Alignment Length:580 Identity:115/580 - (19%)
Similarity:172/580 - (29%) Gaps:219/580 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LEHWTPNQKE-SQTRQ------WINLRNRLSGDSGSSGSGIQLMLALRVKF--WVPVHFILQESV 100
            |.:|.||... |:.|:      ::....|:|.....|...:|...|....|  |.|...|....:
 Frog   213 LNNWEPNDNAMSEHRRHFPNCPFVKSSTRVSSRFSVSNVSMQASSARLKTFASWPPRIPISPTRL 277

  Fly   101 RNL-FYMQARRDLLEGRLTAPDWSGAAKLAALLCQADGLRFNESSLKADCP-------------- 150
            ... ||...|.|.::                ..|...|||..||   .|.|              
 Frog   278 AEAGFYYVGRNDDVK----------------CFCCDGGLRCWES---GDDPWVEHAKWFPRCEYL 323

  Fly   151 MRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKK---RRLSKQKSMEHIEVCTLPAASTTS 212
            :.:|   .|...|:.|:...|.|:|.....|:....|.   .||..:.|.|...:.:.|...|  
 Frog   324 LHIR---GQDYVQEVQERYPHLLDQLLSSSENQNEAKNIPIIRLGTENSQEDEIMMSTPMVQT-- 383

  Fly   213 CSLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSSSQTGLDERLASNPLRVYEEYF 277
                             :.....:.....:|..:...:|..|.|.   ||: |.|:.|...||  
 Frog   384 -----------------ALEIGFNRRLVKRTIQSKMLTSGENYSQ---LDD-LISDLLIAQEE-- 425

  Fly   278 MQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWLLKSIQDLEGYGEELFSGVTTNESATRC 342
                           |...|..:.|:            ..|:.|:        |.:..:..|...
 Frog   426 ---------------QTEEERNRQAE------------ENSLDDI--------SVIRKSRMALSQ 455

  Fly   343 DIAVGAHGITVCRGGEKQSIPFGAIAAAKSLRRTFKLEYVDDHNDRKELE---IKLPKQPIAAGL 404
            .||             .:|||.              |:|:...||....|   |||..|||    
 Frog   456 HIA-------------SRSIPI--------------LDYLLSSNDITAAEYEAIKLKTQPI---- 489

  Fly   405 YRSITERHAFYVCDKVRGVVTNQFTRDLKGTIASMFMENTELGKRYVFDIQHTCREVHDQARRTL 469
                     ....:.:..::|       ||..|...::|              |.:.||.   .|
 Frog   490 ---------LQAQEMIETIIT-------KGKTAVQTLKN--------------CLQKHDP---NL 521

  Fly   470 HERGGDLVAEGAEGCSAVAGGLGASAVGEPGVSPWAMALTTGAGGSMAGKIDLAIREKEAREAAI 534
            ..:   |..|.:..|.                             |:....||:: |::.|    
 Frog   522 FRQ---LFTEQSLKCI-----------------------------SLDDYSDLSM-EEQLR---- 549

  Fly   535 ERCVDTRISEAMQCKICMDRAINTVFNPCCHVIACAQCAARCSNCPNCRVKITSVVKIYL 594
                  |:.|...||.|||:.::.||.||.|::.|..||.....||.||..|...|:.:|
 Frog   550 ------RLQEERTCKKCMDQEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTFL 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 B41 3..>143 CDD:214604 23/107 (21%)
FERM_N 5..67 CDD:286467 6/28 (21%)
FERM_M 93..>143 CDD:278785 9/50 (18%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 20/112 (18%)
zf-C3HC4_3 544..589 CDD:290631 19/44 (43%)
birc2NP_001005449.1 BIR 31..101 CDD:197595
BIR 169..238 CDD:197595 6/24 (25%)
BIR 257..324 CDD:237989 17/85 (20%)
UBA_BIRC2_3 376..425 CDD:270577 11/71 (15%)
DD 436..530 CDD:301326 31/180 (17%)
zf-C3HC4_3 553..598 CDD:290631 19/44 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340284at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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