DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and mylipa

DIOPT Version :9

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_956277.1 Gene:mylipa / 335888 ZFINID:ZDB-GENE-030131-7831 Length:472 Species:Danio rerio


Alignment Length:622 Identity:168/622 - (27%)
Similarity:240/622 - (38%) Gaps:218/622 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWCIVNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWINLRN 65
            |.|.|..|:.....::.|.||||::||.||||.:.|| |::||||: ::.::.|:   .|:||||
Zfish     1 MLCHVTRPDAVVMEIEVDAKANGEDCLNKVCRKLGII-EVDYFGLQ-FSGSKGEN---LWLNLRN 60

  Fly    66 RLSGDSGSSGSGIQLM-------LALRVKFWVPVHFILQESVRNLFYMQARRDLLEGRLTAPDWS 123
            |:|          |.|       |.|||||:|..|.||||..|:||:|..:.||..|.|.... .
Zfish    61 RIS----------QQMDNLTPCRLRLRVKFFVEPHLILQEQTRHLFFMHVKEDLHRGHLRMCS-E 114

  Fly   124 GAAKLAALLCQADGLRFNESSLKADCPMRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKK 188
            .|.:|:|||.||:...:|:::.|                                          
Zfish   115 QAQELSALLAQAEFGDYNQNTAK------------------------------------------ 137

  Fly   189 RRLSKQKSMEHIEVCTLPAASTTSCSLQPSPSASASASASASASASASTSACSQTHSNSSSSSPS 253
                                                                             
Zfish   138 ----------------------------------------------------------------- 137

  Fly   254 NSSSQTGLDERLASNPLRVYEEYFMQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWLLKS 318
                                  |:....|..||....:..|..:|..|..|  |..:.:|..|:.
Zfish   138 ----------------------YWYTELCGSEPNQTTINSIIAKHKALEGL--SQASVEYQALQL 178

  Fly   319 IQDLEGYGEELFSGVTTNESATRCDIAVGAHGITVCRGGEK--QSIPFGAIAAAKSLRRTFKLEY 381
            :..||.||.|..  ...:..|.|..|.||..||.:||....  ..|.:..|..|....::..|..
Zfish   179 VSSLEHYGVEWH--WARDAEAQRLAIGVGPEGIAICRDDFSLVNRISYPIIQIATQSGKSVYLTV 241

  Fly   382 VDDHNDRKELEIKLPKQPIAAGLYRSITERHAFYVCDKVRGVVTNQFTRDLKGTIASMFM-ENTE 445
            ..:.:|...|..||.....|:||||:|||.||||.||.|...|..|::||.||.:||:|: ||..
Zfish   242 TKESSDSVVLLFKLISNRAASGLYRAITETHAFYRCDTVTNAVMMQYSRDFKGHLASLFLNENIN 306

  Fly   446 LGKRYVFDIQHTCREVHDQARRTLHERG-GDLVA----------------EGAEGCSAVAGGLGA 493
            |||:|||||:.|.:||:|.|||.|:..| .|::|                |||..|         
Zfish   307 LGKKYVFDIRRTSKEVYDYARRALYNAGIVDMMARPGERTPSNRSPSREQEGALDC--------- 362

  Fly   494 SAVGEPGVSPWAMALTTGAGGSMAGKIDLAIREKEAREAAIERCVDTRISEAMQCKICMDRAINT 558
                               ||....::   ::||.           .::.||:.|.:|.:..|:.
Zfish   363 -------------------GGCQQSRL---LQEKL-----------QKLREALLCMLCCEEEIDA 394

  Fly   559 VFNPCCHVIACAQCAARCSNCPNCRVKITSVVKIYLP 595
            .|.||.|::.|..|||:..:||.||.::..|..:|||
Zfish   395 AFCPCGHMVCCQNCAAQLQSCPVCRSEVEHVQHVYLP 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 B41 3..>143 CDD:214604 59/146 (40%)
FERM_N 5..67 CDD:286467 26/61 (43%)
FERM_M 93..>143 CDD:278785 21/49 (43%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 40/111 (36%)
zf-C3HC4_3 544..589 CDD:290631 17/44 (39%)
mylipaNP_956277.1 B41 3..190 CDD:214604 76/333 (23%)
FERM_N 5..68 CDD:286467 30/77 (39%)
FERM_M 85..190 CDD:278785 38/236 (16%)
FERM_C_MYLIP_IDOL 185..295 CDD:270016 40/111 (36%)
zf-C3HC4_3 380..425 CDD:290631 17/44 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586518
Domainoid 1 1.000 104 1.000 Domainoid score I6652
eggNOG 1 0.900 - - E1_28NMI
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8309
Inparanoid 1 1.050 246 1.000 Inparanoid score I3258
OMA 1 1.010 - - QHG50100
OrthoDB 1 1.010 - - D1340284at2759
OrthoFinder 1 1.000 - - FOG0005564
OrthoInspector 1 1.000 - - otm24863
orthoMCL 1 0.900 - - OOG6_108913
Panther 1 1.100 - - LDO PTHR23280
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5236
SonicParanoid 1 1.000 - - X5201
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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