DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and epb41b

DIOPT Version :10

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_778259.1 Gene:epb41b / 326287 ZFINID:ZDB-GENE-030130-1 Length:1534 Species:Danio rerio


Alignment Length:479 Identity:92/479 - (19%)
Similarity:148/479 - (30%) Gaps:179/479 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CIVNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQT-RQWIN---- 62
            |.||..:.|....:.:..:.||:...|||..:|:: |.:||||..|     :|.| |.|::    
Zfish     4 CRVNFLDDTLFTWELERDSLGQDLFNKVCEHLNLL-ERDYFGLVMW-----DSPTNRVWLDCAKE 62

  Fly    63 LRNRLSGDSGSSGSGIQLMLALRVKFWVPVHFILQESVRNLFY-MQARRDLLEGRLTAPDWSGAA 126
            :|.::......        ....:||:.|...||.|.:...|. :..|:|:|.|||..|     :
Zfish    63 IRKQIKSPVAE--------FFFSIKFYPPDPSILAEDITRYFLCLHLRKDILIGRLPCP-----S 114

  Fly   127 KLAALLCQADGLRFNESSLKADCPMRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKKRRL 191
            .:.|||    |....:|:|....|                                       .|
Zfish   115 DILALL----GSYTVQSTLGDYDP---------------------------------------NL 136

  Fly   192 SKQKSMEHIEVCTLPAASTTSCSLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSS 256
            .|...:..|.:                                                :|:.|.
Zfish   137 HKNNYVRKIVL------------------------------------------------APNQSK 153

  Fly   257 SQTGLDERLASNPLRVYEEY-FMQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWLLKSIQ 320
            .   |:|::    :.::..| ||.|:     .||.|                       .|:::.
Zfish   154 E---LEEKV----MELHATYRFMSPA-----QADLL-----------------------FLENVM 183

  Fly   321 DLEGYGEELFSGVTTNESATRCDIAVG--AHGITVCRGGEK-QSIPFGAIAAAKSLRRTFKLEYV 382
            .|..||.:|...    :.|:..|:.:|  :.|:.|...|.| .|..:..:......|.||.|:..
Zfish   184 GLPMYGVDLHPA----KDASGEDVMLGVCSEGLIVYEDGVKTNSFFWPRVLKISHKRNTFLLKMR 244

  Fly   383 DDHNDRKE--LEIKLPKQPIAAGLYRSITERHAFYVCDKVRGVVTNQFTRDLKGTIASMFMENTE 445
            ....|..|  |...|........|::...|.|:|             |...|:.|.|...:   .
Zfish   245 PSEEDASEGNLSFSLANYRACKQLWKCSVEHHSF-------------FRNRLQDTKAKRLL---T 293

  Fly   446 LGKRYVFD--IQHTCREVHDQARR 467
            ||.|:.:.  .|..|.|......|
Zfish   294 LGSRFRYHGRKQSECVEASSNITR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 Ubl1_cv_Nsp3_N-like 1..89 CDD:475130 22/90 (24%)
FERM_M 91..>148 CDD:459788 18/57 (32%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 25/114 (22%)
RING-HC_IAPs 545..583 CDD:438173
epb41bNP_778259.1 Ubl1_cv_Nsp3_N-like 2..84 CDD:475130 23/93 (25%)
B41 4..193 CDD:214604 60/333 (18%)
FERM_C_4_1_family 188..281 CDD:270005 24/109 (22%)
FA 290..331 CDD:462582 7/31 (23%)
SAB 1451..1498 CDD:461285
Blue background indicates that the domain is not in the aligned region.

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