DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and Epb41

DIOPT Version :10

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:XP_017449316.1 Gene:Epb41 / 313052 RGDID:1564762 Length:1020 Species:Rattus norvegicus


Alignment Length:408 Identity:86/408 - (21%)
Similarity:141/408 - (34%) Gaps:139/408 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWCIVNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWINLRN 65
            |.|.|:|.:.|......:..|.||:.|::||..:|:: |.:||||..|    ..:.::.|::...
  Rat   209 MHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLL-EEDYFGLAVW----DSTTSKTWLDSAK 268

  Fly    66 RLSGDSGSSGSGIQLMLALRVKFWVPVHFILQESV-RNLFYMQARRDLLEGRLTAPDWSGAAKLA 129
            .:.    ....|:.......|||:.|....|.|.: |....:|.|:|::.|||.. .::..|.|.
  Rat   269 EIK----KQVRGVPWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPC-SFATLALLG 328

  Fly   130 ALLCQAD---------GLRFNESSLKADCPMRMRRELAQQQQQQQQ--------QAQQHRLEQQR 177
            :...|::         |:.: .|..|. .| ...|||.::..:..:        ||....||..:
  Rat   329 SYTVQSELGDYDPELHGVDY-VSDFKL-AP-NQTRELEEKVMELHKSYRSMTPAQADLEFLENAK 390

  Fly   178 --------------------------------KEKEHVLSF---KKRRLSKQKS----------M 197
                                            |:|..:..|   |..::|.::|          .
  Rat   391 KLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPWPKVLKISYKRSSFFIKIRPGEQ 455

  Fly   198 EHIE------------------VC-------------TLP-----------------AASTTSCS 214
            ||.|                  ||             |||                 .|.|...|
  Rat   456 EHYESTIGFKLPSYRAAKKLWKVCVEHHTFFRLTSTDTLPKSKFLALGSKFRYSGRTQAQTRQAS 520

  Fly   215 L---QPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSSSQT----GLDERLA-SNPLR 271
            .   :|:|....:||..||.|...:.:|.|...|...:|:|:.:.||.    |...:.| ...::
  Rat   521 ALIDRPAPHFERTASKRASRSLDGAAAAESTDRSPRPTSAPAIAQSQVMEGPGAPAKKAPKEAVK 585

  Fly   272 VYEEYFMQPSCEGEPPAD 289
            |.|:       .||.||:
  Rat   586 VEEK-------RGEEPAE 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 Ubl1_cv_Nsp3_N-like 1..89 CDD:475130 22/87 (25%)
FERM_M 91..>148 CDD:459788 16/66 (24%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016
RING-HC_IAPs 545..583 CDD:438173
Epb41XP_017449316.1 B41 210..400 CDD:214604 46/202 (23%)
FERM_C_4_1_family 395..488 CDD:270005 11/92 (12%)
FA 498..541 CDD:462582 9/42 (21%)
SAB 658..706 CDD:461285
4_1_CTD 909..1016 CDD:461774
Blue background indicates that the domain is not in the aligned region.

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