DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and frm-1

DIOPT Version :10

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_493601.2 Gene:frm-1 / 173360 WormBaseID:WBGene00001488 Length:4648 Species:Caenorhabditis elegans


Alignment Length:429 Identity:85/429 - (19%)
Similarity:134/429 - (31%) Gaps:167/429 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWI----NLRN 65
            |.||:|.|:..:.:..:.|:....:|.|.::|. |.|||.|..:   .|:..||.|:    |:..
 Worm    29 VLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIE-EREYFSLCFY---DKDEGTRHWLYNDKNIAK 89

  Fly    66 RLSGDSGSSGSGIQLMLALRVKFW--VPVHFILQESVRNLFYMQARRDLLEGRLTAPDWSGAAKL 128
            ::        .|:....:..|||:  .|. .|:.:..|...::|.|||||.|||.|         
 Worm    90 QI--------KGLPWEFSFEVKFYPTTPT-TIVDDHARYYVFLQLRRDLLTGRLPA--------- 136

  Fly   129 AALLCQADGLRFNESSLKADCPMRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKKRRLSK 193
                                                  .|..|.|         :.||       
 Worm   137 --------------------------------------TADTHSL---------LGSF------- 147

  Fly   194 QKSMEHIEVCTLPAAST-------TSCSLQPSPSASASASASASASASAST-SACSQTHSNSSSS 250
               :..||....||..|       .:..|.|            ||.|:..| ......|......
 Worm   148 ---VAQIEFGDAPAEMTDAYEQFIVASKLVP------------SAQANPETYKKIVDLHREMRGQ 197

  Fly   251 SPSNSSSQTGLDERLASNPLRVYEEYFMQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWL 315
            :||.:.:|                  |:          |:.:.:|:                   
 Worm   198 TPSEAENQ------------------FL----------DHCKHLAL------------------- 215

  Fly   316 LKSIQDLEGYGEELFSGVTTNESATRCDIAVGAHGITVCRGGEK-QSIPFGAIAAAKSLRRTF-- 377
                     ||..||..::..:... .|:.:||.||.:.:..:| .|..:..|... ..|||:  
 Worm   216 ---------YGIHLFKAISDKDKKP-VDVGIGAAGINIYQDEQKTHSFSWQNIIKI-GYRRTYFS 269

  Fly   378 -KLEYVDDHNDRKELEIKLPKQPIAAGLYRSITERHAFY 415
             ||:......:.|.|..|||....|...::...|.|.|:
 Worm   270 IKLKAGTVEKNEKTLYFKLPNHVAAKRTWKCAVEHHTFF 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 Ubl1_cv_Nsp3_N-like 1..89 CDD:475130 22/87 (25%)
FERM_M 91..>148 CDD:459788 13/56 (23%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 26/95 (27%)
RING-HC_IAPs 545..583 CDD:438173
frm-1NP_493601.2 B41 27..221 CDD:214604 61/338 (18%)
PH-like 216..310 CDD:473070 26/95 (27%)
FA 321..357 CDD:462582
4_1_CTD 4542..4646 CDD:461774
Blue background indicates that the domain is not in the aligned region.

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