DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnr1 and Epb41l3

DIOPT Version :10

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:XP_006523675.1 Gene:Epb41l3 / 13823 MGIID:103008 Length:1425 Species:Mus musculus


Alignment Length:217 Identity:53/217 - (24%)
Similarity:88/217 - (40%) Gaps:30/217 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWCIVNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWINLRN 65
            |.|.|.|.:|::.....|.::.||...:|||..:|:: |.:||||   |....|:| :.|::...
Mouse   118 MQCKVTLLDGSEYGCDVDKRSRGQVLFDKVCEHLNLL-EKDYFGL---TYRDAENQ-KNWLDPAK 177

  Fly    66 RLSGDSGSSGSGIQLMLALRVKFWVPVHFILQESV-RNLFYMQARRDLLEGRLTAPDWSGAAKLA 129
            .:.....|..    ...:..|||:.|....|.|.: |....:|.|.|::.|||.. .:...|.|.
Mouse   178 EIKKQIRSGA----WHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPC-SFVTLALLG 237

  Fly   130 ALLCQADGLRFNESSLKADCPMRMR------RELAQQ--------QQQQQQQAQQHRLEQQRKEK 180
            :...|::...::......|.....|      :||..:        :.....:|:.|.||..:|  
Mouse   238 SYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHFLENAKK-- 300

  Fly   181 EHVLSFKKRRLSKQKSMEHIEV 202
               ||.....|...|..|.:|:
Mouse   301 ---LSMYGVDLHHAKDSEGVEI 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 Ubl1_cv_Nsp3_N-like 1..89 CDD:475130 24/87 (28%)
FERM_M 91..>148 CDD:459788 13/57 (23%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016
RING-HC_IAPs 545..583 CDD:438173
Epb41l3XP_006523675.1 B41 120..309 CDD:214604 48/203 (24%)
FERM_C_4_1_family 304..397 CDD:270005 4/16 (25%)
FA 406..449 CDD:462582
SAB 754..802 CDD:461285
4_1_CTD 1311..1417 CDD:461774
Blue background indicates that the domain is not in the aligned region.

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