DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnr1 and FARP1

DIOPT Version :10

Sequence 1:NP_001261137.1 Gene:dnr1 / 37575 FlyBaseID:FBgn0260866 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_001273768.1 Gene:FARP1 / 10160 HGNCID:3591 Length:1076 Species:Homo sapiens


Alignment Length:591 Identity:124/591 - (20%)
Similarity:196/591 - (33%) Gaps:222/591 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VNLPNGTQQAVKWDPKANGQECLEKVCRAMNIICEMEYFGLEHWTPNQKESQTRQWINL------ 63
            :.:.:.||:|.:...:|.|:..|:.||..:|:: |.:|||||.  |:.|:...  |::|      
Human    44 IQMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLV-EGDYFGLEF--PDHKKITV--WLDLLKPIVK 103

  Fly    64 ---RNRLSGDSGSSGSGIQLMLALRVKFWVPVHFILQESV-RNLFYMQARRDLLEGRLTAPDWSG 124
               |.:            .:::...|||:.|.|..|||.: |.||.:|.::||.:||||..|.| 
Human   104 QIRRPK------------HVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTS- 155

  Fly   125 AAKLAALLCQADGLRFNESSLKADCPMRMRRELAQQQQQQQQQAQQHRLEQQRKEKEHVLSFKKR 189
            ||.|.:.:.|::...|:|:   .|     |..||:.:...||.|    ||.:..|..|       
Human   156 AALLISHIVQSEIGDFDEA---LD-----REHLAKNKYIPQQDA----LEDKIVEFHH------- 201

  Fly   190 RLSKQKSMEHIEVCTLPAASTTSCSLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSN 254
                    .||                                                      
Human   202 --------NHI------------------------------------------------------ 204

  Fly   255 SSSQTGLDERLASNPLRVYEEYFMQPSCEGEPPADYLRQIAVEHGKLAKLQMSLKTAKYWLLKSI 319
                                         |:.||:                     :.:.||:..
Human   205 -----------------------------GQTPAE---------------------SDFQLLEIA 219

  Fly   320 QDLEGYGEELFSGVTTNESATRCDIAVGAHGITVCRGGEK-QSIPFGAIAAAKSLRRTFKLEYVD 383
            :.||.||..|..  ..:...|:.::||...||.|.:|..| .:..:..:......|:.|.::...
Human   220 RRLEMYGIRLHP--AKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRFLIKLRP 282

  Fly   384 DHND--RKELEIKLPKQPIAAGLYRSITERHAFY------------------------------V 416
            |.|.  :..||..:..:......::...|.|||:                              |
Human   283 DANSAYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRGSSFRFSGRTQKQV 347

  Fly   417 CDKVR--GVVTNQFTRDLK--GTIASMFMENTELGKRYVFDIQHTCREVHDQARRTLHERGGDLV 477
            .|.|:  |....||.|...  .:|.|:..:.|||..           ||.:|::::.....|   
Human   348 LDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNS-----------EVLEQSQQSTSLTFG--- 398

  Fly   478 AEGAE---GCSAVAGGLGASAVGEPGVSPWAMALTTGAGGSMAGKIDLAIREKEAREAAIERCVD 539
             ||||   |.|...|.....:.||||..|......:.||...|.....|..|:|      |..|.
Human   399 -EGAESPGGQSCRRGKEPKVSAGEPGSHPSPAPRRSPAGNKQADGAASAPTEEE------EEVVK 456

  Fly   540 TRISEA 545
            .|..::
Human   457 DRTQQS 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dnr1NP_001261137.1 Ubl1_cv_Nsp3_N-like 1..89 CDD:475130 22/92 (24%)
FERM_M 91..>148 CDD:459788 23/57 (40%)
FERM_C_MYLIP_IDOL 325..435 CDD:270016 28/146 (19%)
RING-HC_IAPs 545..583 CDD:438173 0/1 (0%)
FARP1NP_001273768.1 B41 42..230 CDD:214604 68/334 (20%)
FERM_C_FARP1-like 217..337 CDD:270014 23/121 (19%)
FA 329..372 CDD:462582 7/42 (17%)
RhoGEF 542..728 CDD:238091
PH1_FARP1-like 789..892 CDD:269928
PH2_FARP1-like 962..1059 CDD:270055
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.