DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and LOC688542

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_038954018.1 Gene:LOC688542 / 688542 RGDID:1587637 Length:559 Species:Rattus norvegicus


Alignment Length:519 Identity:155/519 - (29%)
Similarity:231/519 - (44%) Gaps:89/519 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TKYGQLKGQQRRTLYDGEPYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCTYAREKPMQRNS 101
            |..||::|............::|.|||||:||||.|||..|:.|..|.||||.|......:|.::
  Rat    36 THTGQVRGSLVHVKDTDIDVHTFLGIPFAKPPVGPLRFAPPEAPEPWSGVRDATSHPAMCLQNDN 100

  Fly   102 ITNAAE------------GSEDCLYLNVYA-KRLESPKPLPVMVWIFGGGFQVGGASRELY-GPD 152
            :..:.:            .||||||||:|| ........|||||||.||...||.||  :| |..
  Rat   101 MMGSEDMKIMKLILPPISMSEDCLYLNIYAPTHAHEGSNLPVMVWIHGGALTVGMAS--MYDGSM 163

  Fly   153 YFMKHDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKENIASFNGDPESITVFG 217
            .....|:::|||.||:|||||.|..|:..:  ||.|..||:.|||||::|||.|.|:|..:|:||
  Rat   164 LAATEDVVVVTIQYRLGVLGFFSTGDEHAR--GNWGYLDQVAALRWVQQNIAHFGGNPNRVTIFG 226

  Fly   218 ESAGGASTHILMQTEQARGLFHRAIVQSGSALCAWATQPDRKWPQRLGKELGYAGNLESEKELLE 282
            |||||.|....:.:..::||||.||::||..:.........:...|:...|.....::|| .|::
  Rat   227 ESAGGTSVSSHVVSPMSQGLFHGAIMESGVVVLPDLISRSSEMVYRIVANLSGCAAVDSE-TLMQ 290

  Fly   283 FFQQIPASKLAQYCNSIVTQEEQRDYEILAFAPV--IEPYVGDDCVIPKSQQEQLSSAWGNSIPM 345
            ..:                  .:.:.|||....|  |.|.|.|...:||..||.|:||..:.:|.
  Rat   291 CLR------------------GKSEAEILDINKVFKIIPAVVDGEFLPKHPQELLASANFHRVPS 337

  Fly   346 IIG------GTSFEGLFSYRTTLDD------PLYMLS-AFEAIIPKQVRDAIDKEELAEMVRRLK 397
            |||      |.....:|.....:::      |..:.| |.:.::|.:..|.:.:|.:.:.     
  Rat   338 IIGINNDEYGWILPMIFDSAQKIEEITRKTLPTVLKSTALKMMLPPECGDLLMEEYMGDT----- 397

  Fly   398 KSYFDDPDRASMELYECLHILSIKNFWHDIHRTLLARLAYATNLPTYLYRF--------DMDSPH 454
                :||.....:..|.:     .:|...|....:|.. ..::.|.|.|.|        |:..||
  Rat   398 ----EDPKTLQAQFREMM-----GDFMFVIPALQVAHF-QRSHAPVYFYEFQHRSSFFKDVKPPH 452

  Fly   455 FNHYRILKCGKKVRGVCHADDISYMF-YGILSSKLDKNSPEYRTIERLVGMWTSFATTGDPNCE 517
            ..             ..|.|::..:| |.:...|......|.....:::..|.:||..|:||.|
  Rat   453 VK-------------ADHGDEVFLVFGYLVGDIKFPHTEEEELLSRKIMKYWANFARHGNPNSE 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 155/519 (30%)
Aes <117..>222 CDD:223730 52/106 (49%)
LOC688542XP_038954018.1 COesterase 30..538 CDD:395084 155/519 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000017
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100080
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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