DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and nlgn3b

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_005165239.1 Gene:nlgn3b / 567415 ZFINID:ZDB-GENE-060526-197 Length:846 Species:Danio rerio


Alignment Length:650 Identity:174/650 - (26%)
Similarity:259/650 - (39%) Gaps:231/650 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TKYGQLKGQQRRTLYDG-EPYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCTYAREKPMQRN 100
            |..|:|:|.:.....:| .|...:.|:|:|.|||||.||..|..||:|.|||:.|  |..|:...
Zfish    50 TALGRLRGMRVAVATEGLGPVDQYLGVPYAAPPVGEKRFMPPDAPSAWSGVRNAT--RFPPVCPQ 112

  Fly   101 SITNAA---------------------EGSEDCLYLNVYAKRLESPK------------------ 126
            ::.||.                     |.||||||:|:|.......|                  
Zfish   113 TVRNAVPDIMMPVWATYNMDTVATYLQEQSEDCLYMNIYVPTQSGTKRTGDMSADTERTEDDGLR 177

  Fly   127 -----PLPVMVWIFGGGFQVG------GASRELYGPDYFMKHDILLVTINYRVGVLGFLSLKDKE 180
                 |.|||::|.||.:..|      |:....||       :::::|:|||||:|||||..|:.
Zfish   178 DSRDDPRPVMLFIHGGSYMEGTGNIMDGSVLASYG-------NVIVITLNYRVGILGFLSTGDQA 235

  Fly   181 LKIPGNAGLKDQIQALRWVKENIASFNGDPESITVFGESAGGASTHILMQTEQARGLFHRAIVQS 245
            .|  ||.||.||||||||:.:||..|.|||..:||||...|.:...:|..:..:.|||||||:||
Zfish   236 AK--GNYGLLDQIQALRWINKNIGYFGGDPGRVTVFGSGIGASCVSLLTLSHHSEGLFHRAIIQS 298

  Fly   246 GSALCAWAT--QPDRKWPQRLGKELGYAGNLESEKELLEFFQQIPASKLAQYCNSIVTQE----- 303
            ||||.:|:.  || .|:.:.|.:.:|                          ||.:.||:     
Zfish   299 GSALSSWSVNYQP-VKYTRLLAERVG--------------------------CNVLDTQDLVLCM 336

  Fly   304 EQRDYEIL------------AFAPVIEPYVGDDCVIPKSQQEQLSSAWGNSIPMIIGGTSFEGLF 356
            ::|.|..|            ||.|||:   ||  :||...:..:......:..:::|....|| |
Zfish   337 QKRSYRELVEQEIQPARFHVAFGPVID---GD--LIPDDPEVLMEQGEFLNYDIMLGVNQGEG-F 395

  Fly   357 SYRTTLDDPLYMLSAFEAII-PKQ-----------VRDAID--------KEELAEMVRRLKKSYF 401
            .:             .|.:: |::           |.|.:|        |:.|.|.:   |..|.
Zfish   396 RF-------------VEGVVEPEEGGVSGSDFDFTVSDFVDSLYGYPEGKDTLRETI---KFMYT 444

  Fly   402 DDPDRASMEL-YECLHILSIKNFW-------HDIHRTLLARLAYATNLPTYLYRFDMDSPHFNHY 458
            |..||.:.|. .:.|..:...:.|       .|:|    ||  |.:  ||:.|.|      ::| 
Zfish   445 DWADRDNPETRRKTLVAMFTDHQWVEPAVVTADLH----AR--YGS--PTFFYAF------YHH- 494

  Fly   459 RILKCGKKVR----GVCHADDISYMFYGI--------LSSKLDKNSPEYRTIERLVGMWTSFATT 511
                |...::    ...|.|::.|:| |:        ......:|......:  ::..||:||.|
Zfish   495 ----CQSPMKPPWADSAHGDELPYVF-GVPLIGPTELFPCNFSRNDIMLSAV--VMTYWTNFAKT 552

  Fly   512 GDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPESKQF----------VVWDSFYTRESLY 566
            ||||                             .|:|:..:|          |.|..:...:.||
Zfish   553 GDPN-----------------------------KPVPQDTKFIHTKANRFEEVTWAKYGPHDQLY 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 167/606 (28%)
Aes <117..>222 CDD:223730 48/133 (36%)
nlgn3bXP_005165239.1 COesterase 40..609 CDD:278561 173/649 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575305
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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