DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and nlgn3a

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_005157256.1 Gene:nlgn3a / 562702 ZFINID:ZDB-GENE-071219-1 Length:878 Species:Danio rerio


Alignment Length:656 Identity:185/656 - (28%)
Similarity:272/656 - (41%) Gaps:206/656 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GTGQTKELATKYGQLKGQQRRTLYDGE---PYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDC 89
            |.|....:.|:||:|:|  .|.....|   |...:.|:|:|.|||||.||..|:|||||.|:::.
Zfish    64 GQGYYPTVNTQYGKLRG--ARVPLHSEILGPVDQYLGVPYATPPVGEKRFLPPEPPSSWSGIKNA 126

  Fly    90 TYAREKPMQRNSITNAA---------------------EGSEDCLYLNVY-----AKRLE---SP 125
            |:.  .|:...:|.||.                     :.:|||||||:|     .||:.   :.
Zfish   127 THF--APVCPQNIHNAVPEIMMPIWFTFNLDIVATSIQDQNEDCLYLNIYVPTEDVKRISKECTR 189

  Fly   126 KP-----------------------------------LPVMVWIFGGGFQVG------GASRELY 149
            ||                                   .||||:|.||.:..|      |:....|
Zfish   190 KPNKKICRKGGTHSKKQGEDLSDNDGDEDEDIRDTGAKPVMVYIHGGSYMEGTGNMIDGSVLASY 254

  Fly   150 GPDYFMKHDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKENIASFNGDPESIT 214
            |       :::::|:|:|||||||||..|:..|  ||.||.||||||||:.|||..|.||...||
Zfish   255 G-------NVIVITLNFRVGVLGFLSTGDQAAK--GNYGLLDQIQALRWISENIGYFGGDSNRIT 310

  Fly   215 VFGESAGGASTHILMQTEQARGLFHRAIVQSGSALCAWAT--QPDRKWPQRLGKELGYAGNLESE 277
            |||...|.:...:|..:..:.|||||||:||||||.:||.  || .|:.:.|.:::|.  |:...
Zfish   311 VFGSGIGASCVSLLTLSHHSEGLFHRAIIQSGSALSSWAVNYQP-VKYTRLLAEKVGC--NVLDT 372

  Fly   278 KELLEFFQQIPASKLAQYCNSIVTQEEQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWGNS 342
            .::::..::..|.:|       |.|:.|.....:||.|||:   ||  |||...:..:......:
Zfish   373 LDMVDCLRKKSAREL-------VEQDIQPARYHVAFGPVID---GD--VIPDDPEILMEQGEFLN 425

  Fly   343 IPMIIGGTSFEGLFSYRTTLDDPLYMLSAFEAI----IPKQVRDAID--------KEELAEMVRR 395
            ..:::|....|||......:|..       :.:    ....|.|.:|        |:.|.|.:  
Zfish   426 YDIMLGVNQGEGLRFVENVVDSE-------DGVSGNDFDFSVSDFVDSLYGYPEGKDTLRETI-- 481

  Fly   396 LKKSYFDDPDRASMEL-YECLHILSIKNFW-------HDIHRTLLARLAYATNLPTYLYRFDMDS 452
             |..|.|..||.:.|. .:.|..|...:.|       .|:|    ||  |.:  |||.|.|    
Zfish   482 -KFMYTDWADRDNPETRRKTLVALFTDHQWVEPSVVTADLH----AR--YGS--PTYFYAF---- 533

  Fly   453 PHFNHYRILKCGKKVR----GVCHADDISYMFYGI--------LSSKLDKNSPEYRTIERLVGMW 505
              ::|     |...::    ...|.|::.|:| ||        ......||......:  ::..|
Zfish   534 --YHH-----CQSLMKPAWSDAAHGDEVPYVF-GIPMIGPTDLFPCNFSKNDIMLSAV--VMTYW 588

  Fly   506 TSFATTGDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPESKQF----------VVWDSFY 560
            |:||.|||||                             .|:|:..:|          |.|..:.
Zfish   589 TNFAKTGDPN-----------------------------KPVPQDTKFIHTKANRFEEVAWSKYN 624

  Fly   561 TRESLY 566
            .::.||
Zfish   625 PQDQLY 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 178/612 (29%)
Aes <117..>222 CDD:223730 52/153 (34%)
nlgn3aXP_005157256.1 COesterase 69..651 CDD:306613 183/651 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575374
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.