DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and Nlgn1

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_006535478.1 Gene:Nlgn1 / 192167 MGIID:2179435 Length:863 Species:Mus musculus


Alignment Length:651 Identity:184/651 - (28%)
Similarity:264/651 - (40%) Gaps:199/651 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LATKYGQLKGQQRRTLYDGE---PYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCT-YAREK 95
            :.|.:|:::|.::.  .:.|   |...|.|:|:|.||.||.||:.|:|||.|..:|:.| :|...
Mouse    55 VTTNFGKIRGIKKE--LNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAPVC 117

  Fly    96 PMQRNSI-------------TN--------AAEGSEDCLYLNVY-----AKRL------------ 122
            |  :|.|             ||        ..:.||||||||:|     .||:            
Mouse   118 P--QNIIDGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKI 180

  Fly   123 ---------------------------ESPKPLPVMVWIFGGGFQVG------GASRELYGPDYF 154
                                       :|..|.||||:|.||.:..|      |:....||    
Mouse   181 CRKGGPLTKKHTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYG---- 241

  Fly   155 MKHDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKENIASFNGDPESITVFGES 219
               :::::|:|||:|||||||..|:..|  ||.||.|.||||||..|||..|.|||..|||||..
Mouse   242 ---NVIVITVNYRLGVLGFLSTGDQAAK--GNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSG 301

  Fly   220 AGGASTHIL---------MQTEQARGLFHRAIVQSGSALCAWAT--QPDRKWPQRLGKELGYAGN 273
            |||:..::|         ..:...:|||.|||.|||:||.:||.  || .|:.:.|..::|.  |
Mouse   302 AGGSCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQP-AKYARILATKVGC--N 363

  Fly   274 LESEKELLEFFQQIPASKLAQYCNSIVTQEEQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSA 338
            :....||:|..|:.|..:|       |.|:.|.....:||.|||:   ||  |||...|..:...
Mouse   364 VSDTVELVECLQKKPYKEL-------VDQDVQPARYHIAFGPVID---GD--VIPDDPQILMEQG 416

  Fly   339 WGNSIPMIIGGTSFEGLFSYRTTLD-DPLYMLSAFEAIIPKQVRDAIDKEELAEMVRRLKKSYFD 402
            ...:..:::|....|||......:| |.....|.|:..:...|.:.....|..:::|...|..:.
Mouse   417 EFLNYDIMLGVNQGEGLKFVENIVDSDDGVSASDFDFAVSNFVDNLYGYPEGKDVLRETIKFMYT 481

  Fly   403 DPDRASMELYECLHILSIKNFWHDIH------RTLLARL--------AYAT-------NLPTYLY 446
            |                    |.|.|      :||||..        |.||       ..|||.|
Mouse   482 D--------------------WADRHNPETRRKTLLALFTDHQWVAPAVATADLHSNFGSPTYFY 526

  Fly   447 RFDMDSPHFNHYRILKCGKKV---RGVCHADDISYMFYGI--------LSSKLDKNSPEYRTIER 500
            .|      ::|.:.    .:|   ....|.|::.|:. ||        ......||......:  
Mouse   527 AF------YHHCQT----DQVPAWADAAHGDEVPYVL-GIPMIGPTELFPCNFSKNDVMLSAV-- 578

  Fly   501 LVGMWTSFATTGDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPESKQFVVWDSFYTRESL 565
            ::..||:||.|||||..:....|:...:|...|.                   |.|..:..::.|
Mouse   579 VMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEE-------------------VAWTRYSQKDQL 624

  Fly   566 Y 566
            |
Mouse   625 Y 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 179/617 (29%)
Aes <117..>222 CDD:223730 53/154 (34%)
Nlgn1XP_006535478.1 COesterase 53..646 CDD:365897 184/651 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832524
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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