DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and cest-4

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_501043.1 Gene:cest-4 / 177445 WormBaseID:WBGene00015930 Length:592 Species:Caenorhabditis elegans


Alignment Length:534 Identity:130/534 - (24%)
Similarity:218/534 - (40%) Gaps:123/534 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LATKYGQLKGQQRRTLYDGEPYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCTYAREKPMQR 99
            ::|..||:.|.|..:      ::.|:.||.|:||:|:|||:.|:||..|.|||:........:..
 Worm    29 VSTSLGQIDGDQIGS------FHLFKHIPLAKPPIGKLRFQKPEPPEKWTGVRNAKAYGPACISN 87

  Fly   100 NSITNAAEG--SEDCLYLNVYA--KRLESPKPLPVMVWIFGGGFQVGGASRELYGPDY----FMK 156
            :|::.:.:.  .||||::|::.  |.|:| |...|:.:..|||.....|  .::...|    |:.
 Worm    88 SSVSTSPQKWIDEDCLHINIFTSDKCLKS-KDCAVVTYFHGGGLMYDSA--VMFNDTYLLGTFVN 149

  Fly   157 HDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKENIASFNGDPESITVFGESAG 221
            .|:::....:|:|:.....::|:.: .|.|..|.|.:..:.:||..|.:|.|:.:..|:.|.|.|
 Worm   150 QDVIIAIPAFRLGIFSHFVVEDQSI-APTNLALYDILLGVEFVKNEIHNFGGNNQKNTIMGHSYG 213

  Fly   222 GASTHILMQTEQAR---GLFHRAI-VQSGSALCAWATQPDRKWPQRLGKELGYAGNLESEKELLE 282
            |:..:||..:.:..   .||.::| :.||........|..:  ..|..|..|.......||::..
 Worm   214 GSIVNILTFSSKINHDLSLFQQSICMSSGHDFETLEIQIQK--TNRFAKHAGCTVPSIIEKKMTT 276

  Fly   283 FFQQIPASKLAQYCNSIVTQEEQR-----DYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWGNS 342
            ....:...|..|..:::.....||     .|....:....||.:.:   ||  .||.:.|.  ..
 Worm   277 RQSDLYRMKCLQNKDALELLRVQRLLEDEGYPTYGYLVQREPLIQE---IP--YQEFMKSP--KK 334

  Fly   343 IPMIIGGTSFEGLFSYRTTLDDPLYMLSAFEAIIPKQVRDAIDKEELAEMVRRLKKSYFDDPDRA 407
            |||:.|.|.:|        :|         .:..||.:..|:..|...|:..:.:|.:.|     
 Worm   335 IPMLTGCTRYE--------MD---------HSPAPKPIGQALGFENPEEVYMKFRKDWDD----- 377

  Fly   408 SMELYECLHILSIKNFWHDIHRT-------------LLARLAYATNLPTYLYRFDMDSPHFNHYR 459
              |:||         |.:....|             ||::     |:|.|||.:    .:..|.|
 Worm   378 --EVYE---------FGNHSDETQAIMVQVRVRVNNLLSK-----NVPAYLYEY----TYPKHAR 422

  Fly   460 ILKCGKKVRGVCHADDISYMFYGILSSKLDKNSPE----YRTIERLVGMWTSFATTGDP------ 514
                        |.||:.|:. |:...:.|:|..|    |.||      :.:||..|||      
 Worm   423 ------------HTDDLFYLM-GVHRFEKDENEIELGKVYETI------FMNFAKFGDPKEGFEL 468

  Fly   515 ---NCEIIAPVKWD 525
               ..|....|.||
 Worm   469 ANAENESYYEVYWD 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 130/534 (24%)
Aes <117..>222 CDD:223730 27/110 (25%)
cest-4NP_501043.1 Abhydrolase 28..503 CDD:389770 130/534 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X33
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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