DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and ace-3

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_496963.1 Gene:ace-3 / 175076 WormBaseID:WBGene00000037 Length:607 Species:Caenorhabditis elegans


Alignment Length:620 Identity:159/620 - (25%)
Similarity:260/620 - (41%) Gaps:148/620 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRVSFSDKLKLGAKIIGHKVVQYKLGTGQTKELATKYGQLKGQQRRTLYDGEPYYSFEGIPFAQP 67
            ||||.:.:.:..|.::               |:.||.|.::|.:  :.:..:...||.|:|||:|
 Worm    17 LRVSTAQQDEPKASVV---------------EVQTKLGTVRGTE--SDHGNKRVRSFLGVPFAEP 64

  Fly    68 PVGELRFRAPQPPSSWQGVRD-------CTYAREK---PMQRNSITNA-AEGSEDCLYLNVYAKR 121
            |:.|.||:.|.|...|.|...       |...|:.   ....:.:.|| ...||||||:|::|. 
 Worm    65 PINEHRFKKPTPARPWNGTISANTLSPACFQGRDSYDPTFWGSEMWNANTPVSEDCLYVNIWAP- 128

  Fly   122 LESPKPLPVMVWIFGGGFQVGGASRELY-GPDYFMKHDILLVTINYRVGVLGFLSLKDKELKIPG 185
             .....|.|:||:|||||..|..|..|| |.:...:.::::|.||||||..|:|.|..::  :||
 Worm   129 -ADAYNLTVLVWLFGGGFWYGSPSLLLYDGKELATRGNVIVVNINYRVGPFGYLFLDHED--VPG 190

  Fly   186 NAGLKDQIQALRWVKENIASFNGDPESITVFGESAGGASTHILMQTEQARGLFHRAIVQSGSALC 250
            |.|:.||..||.|::::|.||.|:|..|::.|||||.||....:....::|||...|:||||...
 Worm   191 NMGMLDQQLALYWIRDHIFSFGGNPARISLVGESAGAASIVAHLIAPASKGLFQNGILQSGSLDN 255

  Fly   251 AWATQPDRKWPQRLGKELGYAG-NLESEKELLEFFQQIPASKL-----------AQYCNSIVTQE 303
            .|:....::..|:........| |.....:.....:..||..|           .::..:||:::
 Worm   256 KWSMDSPKRAKQKSTALADLVGCNQTKITDQTACLRNTPAQLLIDNIWNVGLNFLEFPFAIVSKD 320

  Fly   304 EQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWGNSIPMIIGGTSFEGLFSYRTTLDDPLYM 368
            :.....:..|..:.|                  ..:...:.::.|....||.|.       .:|.
 Worm   321 QNFFKHLDGFIALRE------------------GTYSTDVNLMFGINHDEGNFW-------NIYN 360

  Fly   369 LSAFEAIIPKQ-VRDAIDKEEL-----------AEMVRRLKKSYFDDP---------DRASMELY 412
            |:.|   ..|| |:..:|::|.           .|:||...|..:.||         |..:.::.
 Worm   361 LAKF---FDKQSVKPGLDRDEFHECVDTAFAVQPELVRTAAKYVYSDPKCTDPKKKTDFYTEQVN 422

  Fly   413 ECL--HILSIKNFWHDIHRTLLARLAYATNLP--------TYLYRFDMDSPHFNHYRILKCGKKV 467
            :.:  :..:..:.|            :|.|.|        .::|.||..| ..|.:      .|.
 Worm   423 QMVGDYFFTCDSIW------------FAHNYPKMAGNQSNVFVYYFDQPS-SANPW------PKW 468

  Fly   468 RGVCHADDISYMF--------YGILSSKLDKNSPEYRTIERLVGMWTSFATTGDPNCEIIA---- 520
            .||.|..:|.|:|        .|....::|.:       |:::..||:||.||.|:....|    
 Worm   469 TGVMHGYEIEYVFGVPLHNTTAGYTKEEMDVS-------EKVIDFWTTFANTGVPSLRKRAVGTT 526

  Fly   521 -PVKWDPLRPGGVENC--LNIADGLEFIPLPESKQ 552
             .:|||  |..|.::.  :||..| .|..:.|.|:
 Worm   527 QKIKWD--RYDGTDHTTWMNIKTG-SFRMIQEIKK 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 148/573 (26%)
Aes <117..>222 CDD:223730 44/105 (42%)
ace-3NP_496963.1 COesterase 28..564 CDD:278561 155/609 (25%)
Aes <123..>234 CDD:223730 48/114 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156965
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S6126
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000017
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.790

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