DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and ache

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_002940088.1 Gene:ache / 100490673 XenbaseID:XB-GENE-923160 Length:600 Species:Xenopus tropicalis


Alignment Length:620 Identity:169/620 - (27%)
Similarity:247/620 - (39%) Gaps:159/620 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LATKYGQLKGQQRRTLYDGEPYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCT--------- 90
            ::|:.|:::|.::..|  .....:|.|||||:|||.::|||..:|...|..|.|.|         
 Frog    31 VSTRSGKVRGLRQPVL--STHVSAFLGIPFAEPPVDKMRFRRSEPKKPWTDVWDATAYPNACYQY 93

  Fly    91 -------------YAREKPMQRNSITNAAEGSEDCLYLNVYAKRLESPKPLP----VMVWIFGGG 138
                         :...:||           ||||||||::.     |.|.|    |||||:|||
 Frog    94 FDTLYPGFPGMEMWNPNRPM-----------SEDCLYLNIWV-----PHPRPSNATVMVWIYGGG 142

  Fly   139 FQVGGASRELYGPDYFM-KHDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKEN 202
            |..|.:|.::|...|.. ..::::|::|||||..|||:|....:..|||.||.||..||:||::|
 Frog   143 FYSGSSSLDVYDGRYLCHAENVIVVSMNYRVGAFGFLTLTPGSVDAPGNVGLFDQRLALQWVQDN 207

  Fly   203 IASFNGDPESITVFGESAGGASTHILMQTEQARGLFHRAIVQSGSALCAWAT---QPDRKWPQRL 264
            ||.|.|||.::|:||||||..|..:.:.:..:..||.:|.:||||....|||   |..|:..:.|
 Frog   208 IAFFGGDPRTVTIFGESAGAVSVGMHVLSPGSHHLFSKAALQSGSPNTPWATITPQEARRRTELL 272

  Fly   265 GKELGYAGNLESEKELLEFFQQIPASKLAQYCNSIVTQEEQRDYEI----------LAFAPVIEP 319
            ||.|..  .:.::.|||.             |..:...:|..|:|.          .||.|    
 Frog   273 GKFLDC--RMGNDTELLN-------------CLRVKQPQELIDHEFSVLPAPSVFRFAFVP---- 318

  Fly   320 YVGDDCVIPKSQQEQLSSAWGNSIPMIIGGTSFEGLFSYRTTLDDPLYMLSAFEAIIPKQVRDAI 384
             |.|....|:..:..::.......|:|:|....||.:..       ||....|.    |.....|
 Frog   319 -VPDADFFPEPPEILMNMGRFKPCPLIMGVNQNEGSYFL-------LYGAPGFS----KNNESLI 371

  Fly   385 DKEELAEMVRRLKKSYFDDPDRASMELYECLHILSIKNFWHDIH---------------RTLLAR 434
            .:||....|:.......|....|.:..|         ..|.|.|               ..::..
 Frog   372 TREEFLGGVKMSVPQANDIALEAVVMQY---------TDWADEHAGVKNREAMDQLVGDHNVICP 427

  Fly   435 LAY------ATNLPTYLYRFDMDSPHFNHYRILKCGKKVRGVCHADDISYMFYGILSSKLDKNSP 493
            |.|      .|....|.|.||       |........:..||.|..:|.::|...|.:.|:....
 Frog   428 LTYFAGKVAETGNRVYTYFFD-------HRASNLAWPQWMGVPHGYEIEFVFGLPLDANLNYTPQ 485

  Fly   494 EYRTIERLVGMWTSFATTGDPN--CEIIAPVKWDPLRPGG-------------------VENC-- 535
            |.....|::..|.:||.|||||  .:...| :| ||....                   |:.|  
 Frog   486 EEALSRRMMRYWANFARTGDPNEGNDAHQP-RW-PLYTASEQRYMALNNKPYQELQGIRVQTCMF 548

  Fly   536 --------LNIADGLEFIPLPESKQFVVWDSFYTR 562
                    |||.|.::........:|..|.::..|
 Frog   549 WNRFLPKLLNITDNIDEAERQWKVEFHRWSTYMMR 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 161/580 (28%)
Aes <117..>222 CDD:223730 50/109 (46%)
acheXP_002940088.1 COesterase 31..549 CDD:395084 162/584 (28%)
AChE_tetra 564..597 CDD:400834 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000017
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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