DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and nlgn3

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_012823589.1 Gene:nlgn3 / 100329188 XenbaseID:XB-GENE-977261 Length:843 Species:Xenopus tropicalis


Alignment Length:650 Identity:189/650 - (29%)
Similarity:267/650 - (41%) Gaps:212/650 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TKYGQLKGQQRRTLYDGE---PYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCTYAREKPMQ 98
            |.||:|:|  .|.....|   |...:.|:|:|.|||||.||..|:||.||.|:|:.|:.  .|:.
 Frog    40 THYGKLRG--TRVPLPSEILGPVDQYLGVPYAAPPVGEKRFLPPEPPPSWSGIRNATHF--SPVC 100

  Fly    99 RNSITNAA---------------------EGSEDCLYLNVY-----AKRLESP---KP------- 127
            ..:|.||.                     |.||||||||:|     .||:...   ||       
 Frog   101 PQNIQNAVPDIMMPVWFTSNLDTVTGYLQEQSEDCLYLNIYVPTEDVKRISKECVRKPNKKICRK 165

  Fly   128 ----------------------------LPVMVWIFGGGFQVG------GASRELYGPDYFMKHD 158
                                        .||||:|.||.:..|      |:....||       :
 Frog   166 GGPSAKKQGEELSDNDEDEEGDIRDTGAKPVMVYIHGGSYMEGSGNMIDGSVLASYG-------N 223

  Fly   159 ILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKENIASFNGDPESITVFGESAGGA 223
            ::::|:|||||||||||..|:..|  ||.||.|||||||||.||:|.|.|||..|||||...|.:
 Frog   224 VVVITLNYRVGVLGFLSTGDQAAK--GNYGLLDQIQALRWVSENVAFFGGDPHRITVFGSGIGAS 286

  Fly   224 STHILMQTEQARGLFHRAIVQSGSALCAWAT--QPDRKWPQRLGKELGYAGNLESEKELLEFFQQ 286
            ...:|..:..:.|||.|||:||||||.:||.  || .|:.:.|.:::|.  |:....::::..:|
 Frog   287 CVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQP-VKYTRLLAEKVGC--NVLDTVDMVDCLRQ 348

  Fly   287 IPASKLAQYCNSIVTQEEQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWGNSIPMIIGGTS 351
            ..|.:|       |.|:.|.....:||.|||:   ||  |||...:..:......:..:::|...
 Frog   349 KSAKEL-------VEQDIQPARYHVAFGPVID---GD--VIPDDPEILMEQGEFLNYDIMLGVNQ 401

  Fly   352 FEGLFSYRTTLD--------DPLYMLSAFEAIIPKQVRDAID--------KEELAEMVRRLKKSY 400
            .|||......:|        |..|.:|.|           :|        |:.|.|.:   |..|
 Frog   402 GEGLKFVENVVDAEDGVSGSDFDYSVSNF-----------VDNLYGYPEGKDTLRETI---KFMY 452

  Fly   401 FDDPDRASMEL-YECLHILSIKNFW-------HDIHRTLLARLAYATNLPTYLYRFDMDSPHFNH 457
            .|..||.:.|. .:.|..|...:.|       .|:|    ||  |.:  |||.|.|      ::|
 Frog   453 TDWADRDNPETRRKTLVALFTDHQWVEPSVVTADLH----AR--YGS--PTYFYAF------YHH 503

  Fly   458 YRILKCGKKVR----GVCHADDISYMF-------YGILSSKLDKNSPEYRTIERLVGMWTSFATT 511
                 |...::    ...|.|::.|:|       ..:......||......:  ::..||:||.|
 Frog   504 -----CQSLMKPAWADAAHGDEVPYVFGVPMVGPTDLFPCNFSKNDVMLSAV--VMTYWTNFAKT 561

  Fly   512 GDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPESKQF----------VVWDSFYTRESLY 566
            ||||                             .|:|:..:|          |.|..:..|:.||
 Frog   562 GDPN-----------------------------KPVPQDTKFIHTKANRFEEVAWSKYNPRDQLY 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 181/606 (30%)
Aes <117..>222 CDD:223730 55/153 (36%)
nlgn3XP_012823589.1 COesterase 31..618 CDD:278561 188/649 (29%)
Aes <195..>302 CDD:223730 54/115 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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