DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and nlgn1

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_017949302.2 Gene:nlgn1 / 100329186 XenbaseID:XB-GENE-6041753 Length:859 Species:Xenopus tropicalis


Alignment Length:646 Identity:182/646 - (28%)
Similarity:266/646 - (41%) Gaps:193/646 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TKYGQLKGQQRRTLYDGE---PYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCT-YAREKPM 97
            |.||:::|.::.  .:.|   |...|.|:|:|.||:||.||:.|:||:.|..:::.| :|...| 
 Frog    57 TTYGKVRGFKKE--LNNEILGPVVQFLGVPYAAPPIGERRFQPPEPPTMWGDIKNSTQFAPVCP- 118

  Fly    98 QRNSI-------------TN--------AAEGSEDCLYLNVY-----AKRL-------------- 122
             :|.:             ||        ..:.||||||||:|     .||:              
 Frog   119 -QNIVGGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKICR 182

  Fly   123 -------------------------ESPKPLPVMVWIFGGGFQVG------GASRELYGPDYFMK 156
                                     :|..|.||||:|.||.:..|      |:....||      
 Frog   183 KEGPLTKKQTDDLGDNEGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNVFDGSVLASYG------ 241

  Fly   157 HDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKENIASFNGDPESITVFGESAG 221
             :::::|:|||:|||||||..|:..|  ||.||.|.||||||..|||..|.|||..|||||..||
 Frog   242 -NVIVITVNYRLGVLGFLSTGDQASK--GNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAG 303

  Fly   222 GASTHIL---------MQTEQARGLFHRAIVQSGSALCAWAT--QPDRKWPQRLGKELGYAGNLE 275
            .:..::|         ..:...:|||.|||.|||:||.:||.  || .|:.:.|..::|.  |:.
 Frog   304 ASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQP-AKYARILATKVGC--NMS 365

  Fly   276 SEKELLEFFQQIPASKLAQYCNSIVTQEEQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWG 340
            ...||:|..|:.|..:|       |.|:.|.....:||.|||:   ||  |||...|..:.....
 Frog   366 DSGELVECLQKKPYREL-------VDQDIQPVRYHIAFGPVID---GD--VIPDDPQVLMEQGEF 418

  Fly   341 NSIPMIIGGTSFEGLFSYRTTLD-DPLYMLSAFEAIIPKQVRDAIDKEELAEMVRR-LKKSYFDD 403
            .:..:::|....|||....:|:| :.....|.|:..:...|.:.....|..:::|. :|..|.|.
 Frog   419 LNYDIMLGVNQGEGLKFVESTVDHEDGVSSSDFDFAVSNFVDNLYGYTEGKDILRETIKFMYTDW 483

  Fly   404 PDRASMEL-YECLHILSIKNFW-------HDIHRTLLARLAYATNLPTYLYRFDMDSPHFNHYRI 460
            .||.:.|. .:.|..|...:.|       .|:|...        ..|||.|.|      ::|   
 Frog   484 ADRNNPETRRKTLLALFTDHQWVAPAVATADLHSNF--------GSPTYFYAF------YHH--- 531

  Fly   461 LKCGKKVRGVC------------HADDISYMFYGI--------LSSKLDKNSPEYRTIERLVGMW 505
                      |            |.|:|.|:| ||        ......||......:  ::..|
 Frog   532 ----------CQTDQVPAWADASHGDEIPYVF-GIPMIGPTELFPCNFSKNDVMLSAV--VMTYW 583

  Fly   506 TSFATTGDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPESKQFVVWDSFYTRESLY 566
            |:||.|||||..:....|:...:|...|.                   |.|..:..::.||
 Frog   584 TNFAKTGDPNQPVPQDTKFIHTKPNRFEE-------------------VAWTRYSQKDQLY 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 177/612 (29%)
Aes <117..>222 CDD:223730 53/154 (34%)
nlgn1XP_017949302.2 COesterase 52..646 CDD:395084 182/646 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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