DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gas and nlgn1

DIOPT Version :9

Sequence 1:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster
Sequence 2:XP_017213657.1 Gene:nlgn1 / 100002610 ZFINID:ZDB-GENE-090918-1 Length:867 Species:Danio rerio


Alignment Length:655 Identity:184/655 - (28%)
Similarity:267/655 - (40%) Gaps:207/655 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LATKYGQLKGQQRRTLYDGE---PYYSFEGIPFAQPPVGELRFRAPQPPSSWQGVRDCT-YAREK 95
            :.|.||:::|.::.  .:.|   |...|.|:|:|.||.||.||:.|:||.||..:|:.| :|...
Zfish    56 VTTTYGKVRGFKKE--LNNEILGPVIQFLGVPYAAPPTGERRFQPPEPPISWSEIRNATQFAPVC 118

  Fly    96 PMQ---------------RNSI----TNAAEGSEDCLYLNVY-----AKRL-------------- 122
            |..               .|||    :...:.|||||:||:|     .||:              
Zfish   119 PQTLLEGRLPDVMLPVWFTNSIEVVSSYVQDQSEDCLFLNIYVPTEDVKRISKECARKPGKKICR 183

  Fly   123 -------------------------ESPKPLPVMVWIFGGGFQVG------GASRELYGPDYFMK 156
                                     ||..|.||||::.||.:..|      |:....||      
Zfish   184 KGGPLSKKQNDDLADNDGAEDEDIRESGSPKPVMVFVHGGSYMEGTGNMFDGSILASYG------ 242

  Fly   157 HDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVKENIASFNGDPESITVFGESAG 221
             :::::|:|||:|||||||..|:..|  ||.||.|.||||||..||||.|.|||..|||||..||
Zfish   243 -NVIVITVNYRLGVLGFLSTGDQAAK--GNYGLLDLIQALRWTSENIAFFGGDPLRITVFGSGAG 304

  Fly   222 GASTHIL---------MQTEQARGLFHRAIVQSGSALCAWAT--QPDRKWPQRLGKELGYAGNLE 275
            .:..::|         ..:...:|||.|||.|||:||.:||.  || .|:.:.|.|::|.  ||:
Zfish   305 ASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQP-AKYARMLAKKVGC--NLK 366

  Fly   276 SEKELLEFFQQIPASKLAQYCNSIVTQEEQRDYEILAFAPVIEPYVGDDCVIPKSQQEQLSSAWG 340
            ...|::|..|:       ::...:|.|:.|.....:||.|||:   ||  |||...|..:.....
Zfish   367 DTVEMVECLQK-------KHYKELVEQDIQPARYHIAFGPVID---GD--VIPDDPQILMEQGEF 419

  Fly   341 NSIPMIIGGTSFEGLFSYRTTLD--------DPLYMLSAFEAIIPKQVRDAIDKEELAEMVRRLK 397
            .:..:::|....|||......:|        |..|.:|:|       |.|.....|..:::|...
Zfish   420 LNYDIMLGVNQGEGLKFVELIVDNENGVQANDFDYAVSSF-------VDDLYGYPEGKDILRETI 477

  Fly   398 KSYFDDPDRASMELYECLHILSIKNFWHDIH------RTLLARL--------AYAT-------NL 441
            |..:.|                    |.|.|      :||||..        |.||       ..
Zfish   478 KFMYTD--------------------WADRHNPETRRKTLLALFTDHQWVAPAVATADLHSSFGS 522

  Fly   442 PTYLYRFDMDSPHFNHYRILKCGKKV---RGVCHADDISYMF-------YGILSSKLDKNSPEYR 496
            |||.|.|      ::|.:.    ::|   ....|.|:|.|:|       ..:......||.....
Zfish   523 PTYFYAF------YHHCQT----EQVPPWADAAHGDEIPYVFGLPMIGPTELFPCNFSKNDVMLS 577

  Fly   497 TIERLVGMWTSFATTGDPNCEIIAPVKWDPLRPGGVENCLNIADGLEFIPLPESKQFVVWDSFYT 561
            .:  ::..||:||.|||||..:....|:...:|...|.                   |.|..:..
Zfish   578 AV--VMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEE-------------------VAWTRYNQ 621

  Fly   562 RESLY 566
            ::.||
Zfish   622 KDQLY 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gasNP_611678.1 COesterase 28..534 CDD:278561 179/621 (29%)
Aes <117..>222 CDD:223730 54/154 (35%)
nlgn1XP_017213657.1 COesterase 53..647 CDD:306613 184/655 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575479
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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