DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4610 and PDIL5-4

DIOPT Version :10

Sequence 1:NP_611677.1 Gene:CG4610 / 37571 FlyBaseID:FBgn0034735 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_680742.2 Gene:PDIL5-4 / 828816 AraportID:AT4G27080 Length:532 Species:Arabidopsis thaliana


Alignment Length:282 Identity:60/282 - (21%)
Similarity:95/282 - (33%) Gaps:100/282 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 KVSDIVRDNLHVNRHVTEEITGPRYCPSIESKILRFGAKVHQVWLEPEGL---DSSLVYPQGISC 343
            |.||:..||.|   |..|...|.|...|:...::.....:|   |||..|   |.|         
plant   281 KGSDLKDDNAH---HDHESYYGDRDTESLVKMVVSLVEPIH---LEPHNLALEDKS--------- 330

  Fly   344 TLPHDQQVELVHAIQGLEKAVVVQPGYG---VE-YDFIDPRELYPTLETKRVPGLFFAGQINGTT 404
                      .::.:.|:||    |..|   || |           :..|:|||.......:|:.
plant   331 ----------DNSSRTLKKA----PSTGGCRVEGY-----------MRVKKVPGNLMVSARSGSH 370

  Fly   405 GYEEAAAQGIIAGANAAGKTRH-SDGRQL------TISRTEGYIGVLIDDLTSLGTNEPYRMFTS 462
            .::.:.       .|.:....| |.||::      ...|...|:|:..|.|..       |.|.:
plant   371 SFDSSQ-------MNMSHVVNHLSFGRRIMPQKFSEFKRLSPYLGLSHDRLDG-------RSFIN 421

  Fly   463 RAEFRLSLRPDNADMRLTQKGYEFGLVSSDRYQHFQQTE---ARLQSAIESLRRLR----KHTHY 520
            :.:    |.|:               |:.:.|....:||   :..|:.:|:.....    .|::|
plant   422 QRD----LGPN---------------VTIEHYLQIVKTEVVKSNGQALVEAYEYTAHSSVAHSYY 467

  Fly   521 WRQALNLPKAKASVEKSAFDML 542
                  ||.||...|.|...:|
plant   468 ------LPVAKFHFELSPMQVL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4610NP_611677.1 MnmG 28..661 CDD:440214 60/282 (21%)
PDIL5-4NP_680742.2 ERGIC_N 67..150 CDD:464000
PDI_a_family 196..308 CDD:239259 11/29 (38%)
COPIIcoated_ERV <339..513 CDD:462327 41/199 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.