DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4610 and ergi-3

DIOPT Version :10

Sequence 1:NP_611677.1 Gene:CG4610 / 37571 FlyBaseID:FBgn0034735 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001369981.1 Gene:ergi-3 / 181652 WormBaseID:WBGene00010725 Length:380 Species:Caenorhabditis elegans


Alignment Length:80 Identity:18/80 - (22%)
Similarity:32/80 - (40%) Gaps:13/80 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SRSAHSAGADIYDVVVIGGGHAGTEASAAAARMGSRTLLLTHKLETIGEMSCNPSFGGIGKGHLM 84
            |.:..:...|||.:.:...|...:|::.......::|.:.|  .:.|.|:.|...:|.       
 Worm    94 SEAQENINDDIYRLRLDPEGRNISESAQKIEINQNKTSVET--TDVIQEVKCGSCYGA------- 149

  Fly    85 REVDALDGVCARCCD 99
                |.||:|...||
 Worm   150 ----AADGICCNTCD 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4610NP_611677.1 MnmG 28..661 CDD:440214 17/72 (24%)
ergi-3NP_001369981.1 ERGIC_N 7..97 CDD:464000 1/2 (50%)
COPIIcoated_ERV 146..360 CDD:462327 7/26 (27%)

Return to query results.
Submit another query.