DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10384 and khdrbs1b

DIOPT Version :9

Sequence 1:NP_001163254.2 Gene:CG10384 / 37567 FlyBaseID:FBgn0034731 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_998400.1 Gene:khdrbs1b / 406516 ZFINID:ZDB-GENE-040426-2344 Length:352 Species:Danio rerio


Alignment Length:331 Identity:105/331 - (31%)
Similarity:158/331 - (47%) Gaps:54/331 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSALEERSLKG-SEK--LKMLDITRDKPVKVAVKVAVPVRDHPKFNFVGKLLGPKGNSMKRLQED 68
            :||..|:..|| :||  ...||:...|.:|:..::.:||:.:||||||||:|||:||::|||||:
Zfish    29 ISAEIEKIEKGDTEKDTESYLDLFTMKNIKLKERILIPVKQYPKFNFVGKILGPQGNTIKRLQEE 93

  Fly    69 TMCKMAVLGRGSMRDRRKEEELRGSGDSRYAHLFEDLHVEISTFAAPAEAHARIAYALAEVRRFL 133
            |..|::|||:|||||:.||||||.:|:.:||||..:|||.|..||...:|:.|:|:|:.|:::||
Zfish    94 TGAKISVLGKGSMRDKNKEEELRKNGEPKYAHLSMELHVFIEVFAPVPDAYMRMAHAMEEIKKFL 158

  Fly   134 VPDYHDDIRQEQMWEMQALT-----------STPALGAHSLEDSHSPTINSSSQVGGTTNSSSNG 187
            .||..|||.|||..||:.|.           ..|..|...|....:|........||.......|
Zfish   159 FPDMMDDICQEQFMEMKFLNGGQEHGGRGRGGPPIRGRGGLPPPGAPRGRGMPPRGGGRGGPPRG 223

  Fly   188 ASGRGL----GGGLADMDTSNDDKSDDASGMECLSAVDKLDCSSSCASLGISGITTISTTSPEHP 248
            .:.||.    ||..|.:...                     .:|:.|.....|       :|..|
Zfish   224 GAARGAPAGRGGPSAQLPRG---------------------AASNRARPPAPG-------APRMP 260

  Fly   249 HPHQHHQQHQQHQQHHAHLHPAH----AHGNQQQQQQVQH----HHSHQAHFHQLLQQAHGGASA 305
            .|.|..:.:.::....::....:    ::.:|.|..:.::    |...|..:....|....|...
Zfish   261 PPPQTQESYDEYSYDESYADTGYESYDSYYSQPQAAETEYYDYGHGETQEGYENYAQDNWNGTPR 325

  Fly   306 AAAACG 311
            .|||.|
Zfish   326 TAAAAG 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10384NP_001163254.2 SF1_like-KH 44..155 CDD:239088 63/121 (52%)
khdrbs1bNP_998400.1 Qua1 7..56 CDD:292891 9/26 (35%)
SF1_like-KH 60..178 CDD:239088 64/117 (55%)
Sam68-YY 269..319 CDD:293176 5/49 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590128
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26159
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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