DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10384 and Sf1

DIOPT Version :9

Sequence 1:NP_001163254.2 Gene:CG10384 / 37567 FlyBaseID:FBgn0034731 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001104261.1 Gene:Sf1 / 22668 MGIID:1095403 Length:639 Species:Mus musculus


Alignment Length:516 Identity:109/516 - (21%)
Similarity:173/516 - (33%) Gaps:171/516 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LEERSLKGSEKL---------KMLDITRD-------KP--VKVAVKVAVPVRDHPKFNFVGKLLG 56
            |..|..:..:||         :|:.:..|       ||  .:|:.||.:|..::|:.||||.|:|
Mouse    94 LNTREFRTRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIG 158

  Fly    57 PKGNSMKRLQEDTMCKMAVLGRGSMRD---RRKEEELRGSGDSRYAHLFEDLHVEISTFAAPAEA 118
            |:||::|.::::...|:.:.|:||:::   .||:.::....|       |.||..::     |..
Mouse   159 PRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGED-------EPLHALVT-----ANT 211

  Fly   119 HARIAYALAEVRRFL-----VPDYHDDIRQEQMWEMQALTSTPALGAHSLEDSHSPTIN--SSSQ 176
            ...:..|:.::|..|     .|:..:|:|:.|:.|:..|..|       |.:..:..:.  .||:
Mouse   212 MENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGT-------LREDDNRILRPWQSSE 269

  Fly   177 VGGTTNSSSNGASGRGLGGGLADMDTSNDDKSDDASGM-------ECLSAVDKLDCSSSCASLG- 233
            ....||::.....|   |.|....|.......|..|..       |.||.:.:|..:...||:| 
Mouse   270 TRSITNTTVCTKCG---GAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGS 331

  Fly   234 ISGITT---------------------ISTTSPEHP----HPHQHHQQHQQH--------QQHHA 265
            .||..|                     :|||....|    .|.::...|..|        ...|:
Mouse   332 TSGPATTPLASAPRPAAPASNPPPPSLMSTTQSRPPWMNSGPSENRPYHGMHGGGPGGPGGGPHS 396

  Fly   266 HLHP----AHAHGNQQQQ------------------QQVQHHHSHQAHFHQLLQQAHGGASAAAA 308
            ..||    ...||....|                  .|..|...|  |....:.|..|.....:.
Mouse   397 FPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGH--HGPPPMDQYLGSTPVGSG 459

  Fly   309 ACGEHL--------------------SGQTTPATAAAL-----------------HTTAMAVALQ 336
            ....|.                    |||..|..:..|                 .:.|.:..|.
Mouse   460 VYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLP 524

  Fly   337 HQ------LTAAGIGGLLKPATGVGATMAGLPTTQAGAAALQLPGDGESSGSTLTLLEPPG 391
            .|      .|:||.|.:  |           |..|..|||...||..:..|:...:..|||
Mouse   525 WQQNTTTTTTSAGTGSI--P-----------PWQQQQAAAAASPGTPQMQGNPTMVPLPPG 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10384NP_001163254.2 SF1_like-KH 44..155 CDD:239088 31/118 (26%)
Sf1NP_001104261.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Nuclear localization signal. /evidence=ECO:0000255 15..19
MSL5 17..257 CDD:227503 45/181 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..94 109/516 (21%)
ZnF_C2HC 278..293 CDD:197667 4/17 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..584 50/263 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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