DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and asic1c

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_021325802.1 Gene:asic1c / 407670 ZFINID:ZDB-GENE-040513-3 Length:562 Species:Danio rerio


Alignment Length:618 Identity:139/618 - (22%)
Similarity:223/618 - (36%) Gaps:187/618 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FLNQTSLHGLKFVGDSGLSSWERSFFLGSFVTALIITVHLISNIYVKWDSTPVIIGIS-PQATSI 92
            |:.:|.:||||.......|..:|.|:|    .||::.:.|:    ..|....::..:| |..|.|
Zfish    41 FVLRTKVHGLKHAFSPHKSKTQRLFWL----LALLVCLGLL----FTWSWNRILYLLSYPAVTKI 97

  Fly    93 LKV-----PFPAITICNMNQVQ--------------------------RSLVANYREGSNESALL 126
            ..|     .|||||.||.|:::                          |..|:..:...:...||
Zfish    98 YMVWSNNMTFPAITFCNQNRLRVSSLTRDDLYYSGYWMDILHLNHTLNRQSVSMLKHSRHRERLL 162

  Fly   127 KLLCESDSWESSEADEEFSASNFVTNNLKISEFVSNHSQSCERMLLFCRFSAVERNCS-QLFQQI 190
            .||  ..|..|...|:          :|..:|.:.......:.|||.|||..  .||: :.|..|
Zfish   163 HLL--DFSHYSPPPDQ----------SLNTTEMIDRLGHQLQDMLLECRFRG--ENCTYKNFTPI 213

  Fly   191 LTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYPEQLPPKFYPATASGTGIT 255
            .|..|.|..||         ...:.|..||...|                          |||  
Zfish   214 YTRYGKCYTFN---------SGLDGNPLLTTLKG--------------------------GTG-- 241

  Fly   256 LGFTAVLDAEMGEYY------CSSTNGPGFKVYFHNPIEVPKVKEAGLISAIGYETNYRIEMVRA 314
            .|...:||.:..||.      ..::...|.||..|:..|.|.:.:.|...|.|::|....:....
Zfish   242 NGLEIMLDIQQDEYLPVWGDTDETSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLL 306

  Fly   315 EAVPA----IRSISRDGRQCLFKNEKELIFYRIYTRLNCENECLAAFLYDTCSCIPFDHPLIYSN 375
            ..:|.    .||...|..           ::..|:...|..:|...:|.:.|:|.....|   ..
Zfish   307 LYLPPPWGDCRSAPMDSE-----------YFSTYSITACRIDCETRYLLENCNCRMVHMP---GT 357

  Fly   376 ASICS-----------------------MGDTSCVRRAQRASNRPGWAKCRQQCLPSCFDLNYLA 417
            :::|:                       :.||.|  ...|........|     :||.....|||
Zfish   358 STVCTPEQYKDCADPALDFLVEKDNDYCVCDTPC--NMTRYGKELSMVK-----IPSKASAKYLA 415

  Fly   418 SGFSFPLASNNFQLANALVESFNKS--YLSKNIAVINVYFRESVYYG--NTKNAY--VGLTEFLS 476
                               :.|||:  |::.||.|::::| |::.|.  ..|.||  .||   |.
Zfish   416 -------------------KKFNKTEQYITDNILVLDIFF-EALNYEKIEQKKAYEVAGL---LG 457

  Fly   477 NVGGVMGLFMGFSVISLAEI---LYFLILKPLAELFVWKRSSHVDSEKSLKHNAFGIEKGQSSDN 538
            ::||.||||:|.||:::.||   ||.::...:....:.||..|..:..:|..:......|.:|::
Zfish   458 DIGGQMGLFIGASVLTILEIFDYLYEVLKDKILGSVLRKRRPHRSASDNLDFSENPTSPGVTSNH 522

  Fly   539 -PSFWHSKELYPK--------GVSISAYENAKS 562
             |||....::..|        ||:.:|.::.::
Zfish   523 VPSFHDGDDVLQKFRAHATHSGVTRTASDSRRT 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 125/544 (23%)
ASC 29..499 CDD:279230 125/544 (23%)
asic1cXP_021325802.1 ASC 34..531 CDD:322155 135/592 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586646
Domainoid 1 1.000 101 1.000 Domainoid score I6864
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I4956
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26495
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.900

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