DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and asic4b

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_999951.1 Gene:asic4b / 407667 ZFINID:ZDB-GENE-040513-6 Length:558 Species:Danio rerio


Alignment Length:575 Identity:128/575 - (22%)
Similarity:213/575 - (37%) Gaps:153/575 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EPSPSAGTERQGSSLF-----LLKSFVRSLRQFLNQTSLHGLKFVGDSGLSSWERSFFLGSFVT- 60
            |.:..|.||..|:.:.     ..|..:..|..|.:.:|||||.    ..|.:.||   ||...| 
Zfish    15 EEAKGASTEGGGTGMLDEGLRRQKEGMADLASFASSSSLHGLA----RALGTSER---LGFRQTL 72

  Fly    61 ---ALIITVHLISNIY-VKWDST-----PVIIGISPQATSILKVPFPAITICNMNQVQRSL---- 112
               ||::::.|.  :| ..|.:.     |.:..:..:...  ::.|||||:||:|:.:.|.    
Zfish    73 WGLALLVSLGLF--LYQATWSAATYLERPHLAALREETRR--ELTFPAITLCNVNRFRFSALTDA 133

  Fly   113 ----VANY-------REGSNESALLKLLCESDSWESSEADEEFSASNFVTNNLKISEFVSNHSQS 166
                :||.       |:|...|.|                 ::...|.:       :........
Zfish   134 DIYHLANLTGLPPKSRKGHRPSEL-----------------QYPPPNML-------DIFQRTGHQ 174

  Fly   167 CERMLLFCRFSAVERNC-SQLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMW 230
            .|.||..|.||.  :|| |:.|..:.|..|.|..|               |.|.|:         
Zfish   175 LEDMLKSCNFSG--QNCSSEDFSVVYTRYGKCYTF---------------NGNKTS--------- 213

  Fly   231 DPESGYPEQLPPKFYPATASGTGITLGFTAVLDAEMGEYY------CSSTNGPGFKVYFHNPIEV 289
                       ||......:|.|:.:    :||.:..||.      ..:|...|.:|..|:..|.
Zfish   214 -----------PKRVRQGGTGNGLEM----MLDIQQDEYLPIWRETNETTLEAGIRVQIHSQNEP 263

  Fly   290 PKVKEAGLISAIGYETNYRIEMVRAEAVPAIRSISRDGRQCLFKNEKELIFYRIYTRLNCENECL 354
            |.:.:.|...:.|::|....:..|...:|      :....|...:|..:..|..|:...|...|.
Zfish   264 PYIHQLGFGVSPGFQTFVSCQEQRLTYLP------QPWGNCRASSEPVIPGYDTYSVSACRLHCE 322

  Fly   355 AAFLYDTCSCIPFDHPLIYSNASICSMGDTSCVRRAQRASNRPGWAKCRQQCLPSCFDLNY--LA 417
            :..:...|:|.....|   .:|.||:.....||.:|..:..:.....|  .|...|....|  ..
Zfish   323 STQVQRECNCRMVHMP---GDADICAPSKIKCVDKALASLQKSTGDSC--PCETPCNLTRYGKEL 382

  Fly   418 SGFSFPLASNNFQLANALVESFNKS--YLSKNIAVINVYFRESVYYG--NTKNAYVGLTEFLSNV 478
            |....|...:    |..|...:.||  |:..|..:::::| |::.|.  ..|.|| .:...|.::
Zfish   383 SMVKIPSRGS----ARYLSRKYQKSEEYIRDNFLILDIFF-EALNYETIEQKKAY-DIAGLLGDI 441

  Fly   479 GGVMGLFMGFSVISLAEILYFL----------ILKPLAELFVWKRSSHVDSEKSL 523
            ||.||||:|.|::::.|||.::          :|||       |:|....::::|
Zfish   442 GGQMGLFIGASILTILEILDYIYEVAKNKIKQLLKP-------KKSQKQTNQRNL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 115/508 (23%)
ASC 29..499 CDD:279230 115/507 (23%)
asic4bNP_999951.1 ASC 54..497 CDD:295594 118/536 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586639
Domainoid 1 1.000 101 1.000 Domainoid score I6864
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I4956
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26504
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.800

Return to query results.
Submit another query.