DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and Asic3

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_038963092.1 Gene:Asic3 / 286920 RGDID:708578 Length:564 Species:Rattus norvegicus


Alignment Length:555 Identity:127/555 - (22%)
Similarity:212/555 - (38%) Gaps:154/555 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PSAGTE----RQGSSLFLLKSFVRSLRQFLNQTSLHGLKFV-GDSGLSSWERSFFLGSFVTALII 64
            |.:|.|    ||.|          .:|.|.:..::|||..: |..||     :...|.:.||:::
  Rat     3 PRSGLEEAQRRQAS----------DIRVFASSCTMHGLGHIFGPGGL-----TLRRGLWATAVLL 52

  Fly    65 TVHLISNIY-----VKW-----DSTPVIIGISPQATSILKVPFPAITICNMNQVQRS-LVANYRE 118
            :  |.:.:|     |::     ..|.:....|.|.|      |||:|:||:|.::|| |..|...
  Rat    53 S--LAAFLYQVAERVRYYGEFHHKTTLDERESHQLT------FPAVTLCNINPLRRSRLTPNDLH 109

  Fly   119 GSNESALLKLLCESDSWESS---------EADEEFSASNFVTNNLKISEFVSNHSQSCERMLLFC 174
            .:. :|||.|    |..|.:         .|...|..|    ....:::..:....|.|.|||.|
  Rat   110 WAG-TALLGL----DPAEHAAYLRALGQPPAPPGFMPS----PTFDMAQLYARAGHSLEDMLLDC 165

  Fly   175 RFSAVERNCS-QLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYPE 238
            |:..  :.|. :.|..|.|..|.|..||                  :.:.|.| ::..|:.|   
  Rat   166 RYRG--QPCGPENFTVIFTRMGQCYTFN------------------SGAHGAE-LLTTPKGG--- 206

  Fly   239 QLPPKFYPATASGTGITLGFTAVLDAEMGEY---YCSSTNGP---GFKVYFHNPIEVPKVKEAGL 297
                       :|.|:.:    :||.:..||   :......|   |.:|..|:..|.|.:.:.|.
  Rat   207 -----------AGNGLEI----MLDVQQEEYLPIWKDMEETPFEVGIRVQIHSQDEPPAIDQLGF 256

  Fly   298 ISAIGYETNYRIEMVRAEAVPA------IRSISRDGRQCLFKNEKE--LIFYR-----IYTRLNC 349
            .:|.|::|....:..:...:|.      ..|:..|.    |..|..  |...|     .|:.:.|
  Rat   257 GAAPGHQTFVSCQQQQLSFLPPPWGDCNTASLDPDD----FDPEPSDPLGSPRPRPSPPYSLIGC 317

  Fly   350 ENECLAAFLYDTCSCIPFDHPLIYSNASICSMGD-TSCVRRAQRASNRPGWAKCRQQC------- 406
            ...|.:.::...|.|.....|   .|:.:||... ..|...|..|..|.....|...|       
  Rat   318 RLACESRYVARKCGCRMMHMP---GNSPVCSPQQYKDCASPALDAMLRKDTCVCPNPCATTRYAK 379

  Fly   407 ------LPSCFDLNYLASGFSFPLASNNFQLANALVESFNKSYLSKNIAVINVYFRESVYYGNTK 465
                  :||.....|||..:                 :.::||:::|:.|::::|....|....:
  Rat   380 ELSMVRIPSRASARYLARKY-----------------NRSESYITENVLVLDIFFEALNYEAVEQ 427

  Fly   466 NAYVGLTEFLSNVGGVMGLFMGFSVISLAEILYFL 500
            .|...::|.|.::||.||||:|.|::::.|||.:|
  Rat   428 KAAYEVSELLGDIGGQMGLFIGASLLTILEILDYL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 119/525 (23%)
ASC 29..499 CDD:279230 119/524 (23%)
Asic3XP_038963092.1 ASC 17..547 CDD:413546 121/531 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345663
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8907
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.750

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