DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and asic-2

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:543 Identity:108/543 - (19%)
Similarity:200/543 - (36%) Gaps:133/543 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FVRSLRQFLNQTSLHGLKFVGDSGLSSWERSFFLGSFVTALIITVHLISNIYVKWDSTPVIIGIS 86
            ||:..:.|.|.:::..:..|.::. :...|.|::..|:..|.:..:.:..:..|:.|.|..:.  
 Worm     6 FVQIFKDFSNWSTVAVVPHVANAN-NKISRIFWIAIFLFVLGMFAYELYILIAKFFSYPATVN-- 67

  Fly    87 PQATSIL--KVPFPAITICNMNQVQRSLVANYREGSNESALLKLLCE-------SDSW------- 135
               |.||  |..||.:|:||||..:.|:|.:....|:.:.|:....:       :|.|       
 Worm    68 ---TEILFEKQIFPVVTVCNMNPYKYSVVKSNSAFSSVNTLMTTYSDATVGTFSTDKWGLYADND 129

  Fly   136 -----ESSEADEEFSASNFVTNNLKISEFVSNHSQSCERMLLFCRFSAVERNCSQLFQQILTDEG 195
                 :|..||.....:|.:::..|:....:...     ::..|.|:.:..:.|...:.|....|
 Worm   130 ETYDLDSRAADALVLEANLISDTAKVPALYTYAD-----LIQDCSFAGIPCSESDFTKFIDPVYG 189

  Fly   196 LCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYPEQLPPKFYPATASGTGITLGFTA 260
            .|..||                            .|....|           :.|..||..|...
 Worm   190 ACYSFN----------------------------EDASLNY-----------SVSREGIQFGLKL 215

  Fly   261 VLDAEMGEYYCSSTNG----------PGFKVYFHNPIEVPKVKEAGLISAIGYETNYRIEM---V 312
            :|....     :.|||          .|.::..::....|.:...|:.:.:|||:...:.:   |
 Worm   216 MLTVTQ-----TKTNGNTDSLPTTKLAGARIGVNSRGSSPGLDSNGIDAGVGYESAVSVSLTQNV 275

  Fly   313 RAEAVPAIRSISRDGRQCLFKNEKELIFYR--IYTRLNCENECLAAFLYDTCSCIPFDHP--LIY 373
            ||:         :....|:.:......:|:  |||...|.|.|........|.|.   :|  .:.
 Worm   276 RAK---------KPYGTCVDREPDSSDYYKDFIYTLETCFNGCKQRDTIAKCQCA---NPRLALG 328

  Fly   374 SNASICS--MGDTSCVR--RAQRASNRPG---WAKCRQQCLPSCFDLNY--LASGFSFPLASNNF 429
            |..:.|.  ..|..|::  :..:.|:.|.   ..:|  .|.|.|.:..|  ..|...||  |.::
 Worm   329 STDTACQPIKADLDCLQTLKGNQTSSTPNIDLLVEC--NCNPPCDESTYTPTVSLAQFP--STSY 389

  Fly   430 QLANALV------ESFNKSYLSK---------NIAVINVYFRESVYYGNTKNAYVGLTEFLSNVG 479
            .:|.:..      .|.|..:.||         |..:|.|:.....|...|:.|...::..::::|
 Worm   390 YVATSSTAGVGSCSSTNSKFSSKSDCQKWYNNNGMIIQVFLETLSYELYTETAGYTVSNVINDLG 454

  Fly   480 GVMGLFMGFSVISLAEILYFLIL 502
            |..||::|.||||:.|:...:::
 Worm   455 GQAGLWLGLSVISVVEMTGLMLV 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 106/532 (20%)
ASC 29..499 CDD:279230 106/531 (20%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 106/532 (20%)
ASC 13..471 CDD:279230 105/528 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7217
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.680

Return to query results.
Submit another query.