DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and acd-5

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_491196.3 Gene:acd-5 / 189051 WormBaseID:WBGene00020903 Length:714 Species:Caenorhabditis elegans


Alignment Length:644 Identity:140/644 - (21%)
Similarity:244/644 - (37%) Gaps:162/644 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEPSPSAGT--------ERQGSSLFL---------------LKSFVRSLRQFLNQTSLHGLKFVG 42
            ::||.|.|:        .::.|.|.:               :.|..|....|.|.|:|||.|.:.
 Worm    63 IKPSASKGSFLSELKPFSKRASQLIVDVPVAHLRKIKNTEGVSSITRESEHFSNTTTLHGPKRIY 127

  Fly    43 DSGLSSWERSFFLGSFVTALIITVHLISNIYVKWDSTPVIIGISPQATSILK---VPFPAITICN 104
            :.  ..|...|::..:::::|:.:..::::...:.|.|.:    .|.:.:|.   :.||.:|:|:
 Worm   128 NG--KGWSCVFWVFIWISSMIMLLTQVTSLISMYISKPTV----SQVSFLLSEGGMQFPRVTVCS 186

  Fly   105 MNQVQRSLV-------------ANYREGSNESALLKLLCESDSWESSEADEEF-----SASNFVT 151
            .|.::|:.|             .:|....|..| :.|...:|:......|..|     |..||..
 Worm   187 FNPIKRTTVEALNSTKDLSDDLLDYLMMFNSDA-MTLYGRADAASLHSGDNVFKHYVSSHPNFTA 250

  Fly   152 NNLKISEFVSNHSQSCERMLLFCRFSAVERNCSQLFQQILTDEGLCCVFNFQPPEYLYKPFANNN 216
            :|     |..:...||..|...|.|.....:|.:....|.:|.|.|...|.|             
 Worm   251 DN-----FFMDAGFSCGDMFKMCSFGGRRFDCCKYATPIFSDLGKCFTLNLQ------------- 297

  Fly   217 RNLTNSDGFESVMWDPESGYPEQLPPKFYPATASGTGITLGFTAVLDAEMGEYYCSSTNG----- 276
                .||         :|....|..|          ||..|...:||:.:.|.:.|.|:|     
 Worm   298 ----GSD---------KSWMKMQTEP----------GIAAGLQIILDSHLEEQFDSETDGVTPVF 339

  Fly   277 -----PGFKVYFHNPIEVPKVKEAGLISAIGYETNYRIEMVRAEAVPAIRSI---SRDGRQCLFK 333
                 .||:.|.|:..|:|.:...|:  |:..::      |...|:.:.:.|   |.....|...
 Worm   340 SSAFENGFRFYIHSSEEIPFLASEGI--AVSPDS------VVYSALSSSKYILLSSNAWGNCSDS 396

  Fly   334 NEKELIFYRIYTRLNCENECLAAFLYDTCSCIP--FDHPLIYSNAS-----ICSMGDTSCVRRAQ 391
            ..:...:...||...|...|.|.:..:.|.|.|  ::|...:::.:     ||.  ||...:...
 Worm   397 WPRGYDYSFPYTSAMCSTMCKAQYFQNLCGCSPSIYNHLNRFNDCTPYETFICM--DTKMKKVVN 459

  Fly   392 RASN--RPGWAKCRQQCLPSCF-DLNYLASGFSFPLASNNFQLANALV--------ESFNKSYLS 445
            ::.|  .|...:|:.:|....: ..|....|.|          ..||:        |::...::.
 Worm   460 QSFNIEMPTCEECKVECKSQVYHSFNSYGKGLS----------RGALMWLTKQGKQETWTIPHMK 514

  Fly   446 KNIAVINVYFRESVYYGNTKNAYVGLTEFLSNVGGVMGLFMGFSVISLAEILYFLILKPLAEL-F 509
            .|..|:||:||:..|....:...:.|||.||::||.||:|||.||.::.|:  ||.|..:..: |
 Worm   515 LNFQVVNVFFRDMSYTEYIQKRGMSLTELLSDIGGNMGMFMGMSVFTIIEL--FLFLSKIGWIGF 577

  Fly   510 VWKRSSHVDSEKSLKHNAFGIEKGQSSDNPSFWHSKELYPKGVSISAYENAKSTKGLNY 568
            ..||..::.|:|..:.                .|.|||.........:.:.||.|.:::
 Worm   578 SRKRRDYMYSKKKNEE----------------MHEKELEDVVTGFKLFRHRKSGKDMSH 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 117/522 (22%)
ASC 29..499 CDD:279230 117/521 (22%)
acd-5NP_491196.3 ASC 114..547 CDD:279230 107/500 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.830

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