DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and del-4

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:568 Identity:114/568 - (20%)
Similarity:206/568 - (36%) Gaps:147/568 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 TSLHGLKFVGDSGLSSWERSFFLGSFVTALIITVHLISNIYVKWDSTPVIIGISPQAT-SILKVP 96
            ||.||:..:|.:. :.|.|:|    ::..:::::.|....::...:..:...::.:.| ...:..
 Worm    19 TSTHGVPHIGMAN-ARWLRAF----WILVVVVSIALFIWQFITLLTNYLSFSVNTETTLQFAERT 78

  Fly    97 FPAITICNMNQVQRSLVANYREGSNESALLKLLCESDSWESSEADEEFSASNFVTNNLKISEFVS 161
            ||.:|||::|..:.|      |..:....:..|.::.:.:||.|.....||.......:.|::..
 Worm    79 FPTVTICHLNPWKLS------ETKSVDPDMSALIDAYNSDSSSAQFGLPASLTADRQQQASKWTL 137

  Fly   162 NHSQ---------------SCERMLLFCRFSAVERNCSQLFQQILTDEGLCCVFN-FQPPEYLYK 210
            .:|:               |.:.|::.|.::|  :.|:      :||      || |..|.|   
 Worm   138 MYSERLNEKQYNDAADIAYSYDDMVVSCTYNA--KTCN------ITD------FNDFYNPSY--- 185

  Fly   211 PFANNNRNLTNSDGFESVMWDPESGYPEQLPPKFYPATASGTGITLGFTAVLDAEMGEYYCSSTN 275
                .|....|:||..|                     :|..|...|...|:..:. :.|...|.
 Worm   186 ----GNCLQFNTDGMYS---------------------SSRAGPLYGLRMVMRTDQ-DTYLPWTE 224

  Fly   276 GPGFKVYFHNPIEVPKVKEAGLISAIGYETNYRIEMVRAEAVPAIRSISRDGRQCLFKNEKELIF 340
            ..|..:..|...|:|.....|..:..|..::..:..|:.      ..:|:....|..|.:.:...
 Worm   225 ASGVIIDIHMQDEIPYPDVFGYFAPPGTASSLGVSYVQT------TRLSKPYGSCTTKTKLKTTH 283

  Fly   341 YR-IYTRLNCENECLAAFLYDTCSCIPFDHPLIYSNASICSMGDTSCVRRAQRASNRPGWAKCRQ 404
            |. .||...|...|:...:..:|.|.   :| .||:||..:. ..||....|..||.        
 Worm   284 YTGTYTVEACFRSCMQEKIIASCGCY---YP-AYSHASNTTQ-YVSCDNGVQTLSNL-------- 335

  Fly   405 QCLPSCFDLNYLASGFSF----------PLASNNFQLANALVESFNKSYL--------------- 444
                :|.||...|....|          |...:::.:..:..:..:.||:               
 Worm   336 ----NCVDLINSADSTEFDVLTDCDCPQPCEIDSYGVTVSTAQWPSDSYVPTECNPGGPSGPWDA 396

  Fly   445 ---------SKNIAVINVYFRESVYYGNTKNAYVGLTEFLSNVGGVMGLFMGFSVISLAE--ILY 498
                     ..|..:|.:|:....:...|::.......|:|:|||.:|||:|.|:||..|  :|.
 Worm   397 SGESCLDWYKANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLI 461

  Fly   499 FLI-------------LKPLAELFVWKRSSHVD--SEKSLKHNAFGIE 531
            ||:             ::.| |:.:.|....||  :||..||.....|
 Worm   462 FLVFFYCCTHKSRRAEIEQL-EMDIKKAKDDVDQVAEKRKKHQKANAE 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 102/519 (20%)
ASC 29..499 CDD:279230 102/519 (20%)
del-4NP_492230.2 ASC 8..466 CDD:295594 104/523 (20%)
deg-1 14..460 CDD:273309 101/517 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7217
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.680

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