DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and acd-3

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001257250.1 Gene:acd-3 / 182963 WormBaseID:WBGene00007775 Length:484 Species:Caenorhabditis elegans


Alignment Length:574 Identity:105/574 - (18%)
Similarity:179/574 - (31%) Gaps:196/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SPSAGTERQGSSLFLLKSFVRSLRQFLNQTSLHGLKFVGDSGLSSWERSFFLGSFVTALIITVHL 68
            |.|:....:.....:|..:....::|.:.|:.||:..:..|  .:|....|.|..|...:....:
 Worm     8 SSSSSEYEEEEERIVLHVYDDESKEFTSLTTYHGMIRIYTS--ETWPSRIFWGVVVVTCVTLFMI 70

  Fly    69 ISNIYVKWDSTPVIIGISPQATSI--LKVP---FPAITICNMNQVQRSLVANYREGSNESALLKL 128
            ...:.:::.::      .|.||.|  .::|   .|:|:||..         .::...|   |..|
 Worm    71 QGGVLLEFYNS------HPTATKIDEYRLPTSFLPSISICPY---------GFKTDDN---LFYL 117

  Fly   129 LCESDS--------WESSEADEEFSASNFVTNNLKISEFVSNHSQSCE-----------RMLLFC 174
            :.:.|.        |::|.                 .:.:...|..||           :::.||
 Worm   118 ITQGDKDVYIPPDYWKNSS-----------------KQLLKRLSYKCEDVVESIMINPNQIIDFC 165

  Fly   175 RFSAVERNCSQLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYPEQ 239
            ..|..:          :|:.|.|  |.|:.    ::.|..|...:.....|..:       |...
 Worm   166 ANSRTQ----------ITEIGKC--FTFEN----WREFETNTLKIKLKSDFTKM-------YTAH 207

  Fly   240 LPPKFYPATASGTGITL--GFTAVLDAEMGEYYCSSTNGPGFKVYFHNPIEVPKVKEAGLISAIG 302
            :..::|..:.|.|...|  |..|.|...:.|.:....|..|          ..||:..       
 Worm   208 IHSEYYEVSRSSTQAWLKPGSHAKLSFRIEEQHNLPQNNWG----------TCKVQTG------- 255

  Fly   303 YETNYRIEMVRAEAVPAIRSISRDGRQCLFKNEKELIFYRIYTRLNCENECLAAFLYDTCSCIPF 367
                                                   .||..|.|..:||.|....:|.|.||
 Worm   256 ---------------------------------------EIYNHLGCLEQCLVAGYDQSCHCSPF 281

  Fly   368 DHPLIYSNASICSMGDTSCVRRAQRASNRPGWAKCRQQCLPSCFDLNYLASGFSFPLASNN---- 428
            .:.....:.||            ....|.|...:....|...|:..||:....|...:.:|    
 Worm   282 FNRFTRFHCSI------------DELLNCPKLKEVPCDCPMQCYSQNYVLQPVSLLKSRSNISTV 334

  Fly   429 -FQLANALVESFNKSYLSKNIAVINVYFRESVYYGNTKNAYVGLTEFLSNVGGVMGLFMGFSVIS 492
             |.|.:.|:.|..:....|.|                        :.:|.:|||||||:|.|.::
 Worm   335 TFHLNSNLLRSHQQYKRFKQI------------------------DLMSYIGGVMGLFLGMSCVT 375

  Fly   493 LAEILYFLILKPLAELFVWKRSSHVDSEKSLKHNAFGIEKGQSSDNPSFWHSKE 546
            |.|:..:|.......|            .|.:|.|| ||:..|:::.|...|.|
 Worm   376 LLEVFIYLFKTIFGTL------------NSTRHKAF-IERLLSNEDGSIHGSHE 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 90/501 (18%)
ASC 29..499 CDD:279230 90/500 (18%)
acd-3NP_001257250.1 ASC 33..382 CDD:279230 90/500 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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