DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and delm-2

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_491296.1 Gene:delm-2 / 182851 WormBaseID:WBGene00016063 Length:608 Species:Caenorhabditis elegans


Alignment Length:632 Identity:141/632 - (22%)
Similarity:237/632 - (37%) Gaps:162/632 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PSPSAGTERQGSSL---------FLLKSF---------VRSLRQFLNQTSLHGLK--FVGDSGLS 47
            |.||. |.|..|||         ..||.|         .|..:.|...|::||.|  |.|    .
 Worm    25 PYPSV-TFRPNSSLSHLIIEVPVAQLKKFKHAGETVSVERETQHFCETTTMHGPKRIFQG----K 84

  Fly    48 SWERSFFLGSFVTA---LIITVHLISNIYVKWDSTPVIIGISPQATSILK---VPFPAITICNMN 106
            .|...|:|....|:   ||..|.::::.|:   |.||:..:|    .::.   :.||.|||||..
 Worm    85 RWATLFWLIMVCTSIGLLITQVCILASNYL---SKPVVSDVS----FLINEEGIQFPQITICNFT 142

  Fly   107 QVQRSLVANYREGSNES-----------ALLKLLCESDSW----ESSEADEEFSASNFVTNNLKI 156
            .::::.|....:....|           ..:.:|..|.:|    |.::..:|:..:|   .|..:
 Worm   143 PIRKTFVNEMNKTGQISPNMINYIMHWFTEVPILIGSSNWQLLHEGNKDLQEYQKNN---PNFTV 204

  Fly   157 SEFVSNHSQSCERMLLFCRFSAVERNCSQLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTN 221
            ..|..:...||..:...|.|.....:|..:...:||..|.|...:                    
 Worm   205 QGFFIDAGFSCSDIFKLCSFQGETFDCCSISTPVLTPLGKCYTLD-------------------- 249

  Fly   222 SDGFESVMWDPESGYPEQLPPKFYPATASGTGITLGFTAVLDAEMGEYYCSS-------TNG--P 277
                  ::...:....:|..|          ||..|....|||.:.|.:..|       ||.  .
 Worm   250 ------LLSSTKPSMHKQTEP----------GIQAGLAITLDAHLEEQFDGSNGMDALFTNSFVN 298

  Fly   278 GFKVYFHNPIEVPKVKEAGLI---SAIGYETNYRIEMVRAEAVPAIRSISRDGRQCLFKNEKELI 339
            ||:.:.|.|..:|.:......   :::.|..   |...|.|.:|     :.....|.......:.
 Worm   299 GFQYFVHPPNTIPHLSSDEFTVTPNSVAYTA---ISSERFELLP-----TNKWGNCTEHYPSGIK 355

  Fly   340 FYRIYTRLNCENECLAAFLYDTCSCIPFDHPLIYS---NASICSMGDT-SCVRRAQRASNRPG-- 398
            ....|...||.:.|.|.|..:.|.|.    |.:|:   |...|:..:| :||.....::|..|  
 Worm   356 SDLPYLTGNCVSLCKAKFFMENCGCT----PAVYNNERNLKECTPFETLACVNNHNGSNNATGKL 416

  Fly   399 ---WAKCRQQCLPSCFDLNYLA---SGFSFPLASNNFQLANALVESFNKSYLSKNIAVINVYFRE 457
               ..:| .||...|.:|.|.|   .|..|  ::..|:.......::..:::..|..:|::::::
 Worm   417 EFKLPRC-AQCAQQCNNLIYRAFNSQGNQF--SARAFEWFRTNNSNWTMAHIKTNFQIIHIFYQD 478

  Fly   458 --SVYYGNTKNAYVGLTEFLSNVGGVMGLFMGFSVISLAEI-LYFL------ILKPLAELFVWKR 513
              :..|...::|  .:::.|||:||.||:|:|.|:|::.|| |||.      |.|...|....||
 Worm   479 MSNTEYNQVQDA--SISDLLSNIGGNMGMFLGMSLITITEICLYFSKIIWLGISKKRREYMYSKR 541

  Fly   514 ---SSH-------------VDSEKSLKHNAFGIE---KGQSSDNPSF 541
               .:|             ::|::.|. :..|.|   ...|:||..|
 Worm   542 VHEKTHKKEIVETVEKMKVIESKRKLS-SPIGFENQISWNSNDNVEF 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 113/520 (22%)
ASC 29..499 CDD:279230 113/519 (22%)
delm-2NP_491296.1 ASC 68..520 CDD:279230 112/518 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162346
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.760

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