DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and del-9

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_508622.2 Gene:del-9 / 182767 WormBaseID:WBGene00015957 Length:579 Species:Caenorhabditis elegans


Alignment Length:559 Identity:114/559 - (20%)
Similarity:190/559 - (33%) Gaps:183/559 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SPSAGTERQGSSLFLLKSFVRSLRQFLNQTSLHGLKFVGDSGLSSWE--RSFFLGSFVTALIITV 66
            |.|..::....||:||:          ..::||||:   |..|||..  |..::...:.||.:|.
 Worm    68 SLSDSSDDNDDSLYLLR----------ETSTLHGLR---DVMLSSSGRLRMVWVLIVILALFMTF 119

  Fly    67 HLISNIYVKWDSTPVIIGISPQATSILKVPFPAITICNMNQVQRSLVANYREGSNESALLKLLCE 131
            .....|..::....:::....|....:.|  |.:.:|..|::.||.:    |.:|.|..|....|
 Worm   120 QGCYQIMDEYSMRRIVVSYFIQEAQSIWV--PDVVVCPYNRLNRSFI----EANNVSFELAQFLE 178

  Fly   132 SD------SWESSEADEEFSASNFVT-----------NNLKISEFVSNHSQSCERMLLFCRFSAV 179
            ..      .:|:.:..:|...|...|           ||:..::|:...|.:||      .|...
 Worm   179 LSFPSMDLPFENIQQQQEEIISKIDTLDFQIEILLEQNNMTYAQFLRKASLNCE------AFFED 237

  Fly   180 ERNCSQLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYPEQLPPKF 244
            .|.|:.. .:|:|..|.|  |.....:.....|.|.:|                  |...||.::
 Worm   238 SRRCANT-TEIMTSAGKC--FRMAGIKQEIAGFGNGDR------------------YVIDLPEEY 281

  Fly   245 YPATASGTGITLGFTAVLDAEMGEYYCSSTNGPGFKVYFHNPIEVPKVKEAGLISAIGYETNYRI 309
            |                              .||.....::.: :.|:.|.|  ..|..:..:..
 Worm   282 Y------------------------------NPGINQMINSGV-IIKLAERG--QGIDNDLTFLP 313

  Fly   310 EMVRAEAVPAIRSISRDGRQCLFKN-----EKELIFYRIYTRLNCENECLAAFLYDTCSCIPFDH 369
            ..|.| .:|.:      |.|..|.|     |.|...:..|:|::|..:||......||.|.|   
 Worm   314 AGVHA-IMPLL------GTQFEFMNDPPRYECEEDPHGNYSRVHCFEDCLTLDAQQTCQCSP--- 368

  Fly   370 PLIYSNASICSMGDTSCVRRAQRASNRPGWAK--CRQQCLPSCFDLNYLASGFS--FPLASNNFQ 430
                                  .|:..|.:..  |....|..||        |:  ||..||   
 Worm   369 ----------------------AAAQNPAYPDKLCTATQLYHCF--------FTKLFPEDSN--- 400

  Fly   431 LANALVE-------------SFNK--SYLS------------------KNIAVINVYFRESVYYG 462
            |:.|:|:             ::||  ||.|                  |...::::|:.|..|..
 Worm   401 LSKAIVDACKKECKAPCHAWNYNKQVSYSSIPSEASKKLLPREEWEKMKRKIILDIYYSELDYTI 465

  Fly   463 NTKNAYVGLTEFLSNVGGVMGLFMGFSVISLAEILYFLI 501
            ......:.|:..::.:||...||.|.|:|||.:|:.:.:
 Worm   466 IKHVIAMPLSSLIAQIGGQFSLFAGGSLISLCQIVIYSV 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 108/531 (20%)
ASC 29..499 CDD:279230 108/530 (20%)
del-9NP_508622.2 ASC 85..502 CDD:307141 108/528 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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