DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and del-8

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_509617.2 Gene:del-8 / 182514 WormBaseID:WBGene00007518 Length:553 Species:Caenorhabditis elegans


Alignment Length:561 Identity:111/561 - (19%)
Similarity:189/561 - (33%) Gaps:185/561 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LGSFVTALIITVHLISNIYVKWDSTPVIIGISPQATS-----ILKVPFPAITIC-------NMNQ 107
            ||:|.|.|||..      |::          .|.|||     :..:.|||||||       |:..
 Worm    66 LGAFTTVLIIIE------YIQ----------GPTATSTTIRLVDSLEFPAITICPKVPDSFNITG 114

  Fly   108 VQRSLVANYREGSNESA--LLKLLCESDSWESSEADEEFSAS--NFVTNNLKI-SEFVS------ 161
            ::..:..:..:.|:::|  ||:........|:......|:.:  :.:.|..|| ||..|      
 Worm   115 LRGDIKESLPDISDKTADDLLEFFVAGSGLENMNDVTYFNRTYLSHLNNYYKIWSEGYSVDGFFE 179

  Fly   162 ----NHSQSCERMLLFCRFSAVERNCSQ--LFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLT 220
                .:...||.:...|:.:....:|..  :.::::...|:|           |:  ...|.|.:
 Worm   180 IIQQKYGYKCEDLFYECQLAGKILDCCNDLMVRRVVMRRGIC-----------YQ--TRKNVNQS 231

  Fly   221 NSDGFESVMWDPESGYPEQLPPKFYPATASGTGITLGFTAV-LDAEMGEYYCSSTNGPGFKVYFH 284
            .:|....:::.             ..|..|.|.:...:|.. |...:.:.:...|..|.|.:|  
 Worm   232 EADDIGRIVFS-------------LKAPTSYTSVKTNYTQTQLIVYITDNHDVVTEFPRFYLY-- 281

  Fly   285 NPIEVPKVKEAGLISAIGYETNYRIEMVRAEAVPAIRSISRDGRQCLFKNEKELIFYRIYTRLNC 349
             |.|..:::....:          ||:::.:.|.......||.                      
 Worm   282 -PNEWNRMRFTARL----------IELIQNKGVCTNHIFGRDA---------------------- 313

  Fly   350 ENECLAAFLYDTCSCIPFDHPLIYSNASICSMGDTSCVRRAQRASN------RPGW--AKCRQQC 406
              |||....|.:...|||:..|.|.. ||..:..|:.|.:....::      :..|  |:..::|
 Worm   314 --ECLVRKWYLSNIIIPFNCTLPYLK-SITKLPPTTGVCKPDVIADNYLDKIQYVWNSAEVNEEC 375

  Fly   407 LPSC----FDLNYLASGFSFPLASNNFQLANALVESFNKSYLSKNIAVINVYFRESVYYGNTKNA 467
            .|.|    :..:...|....|.....|.|.    .|||                 .:.|...|..
 Worm   376 TPGCNRWDYQTSVQQSQTLSPFEDYTFNLE----ASFN-----------------DLQYEYVKEI 419

  Fly   468 Y-VGLTEFLSNVGGVMGLFMGFSVISLAE-ILYFLILKPLAELFVWKRSSHVDSEKSLKHNAFGI 530
            | ..:..|:|.:||..|.|:|.|:|:|.: :||..                        |:||..
 Worm   420 YTTSIPGFMSQIGGQFGFFLGLSIITLIQMVLYGF------------------------HSAFMF 460

  Fly   531 EKGQ------------SSDNP----SFWHSKELYPKGVSIS 555
            .|..            |.|.|    :|.:|..:||...:||
 Worm   461 AKKHIQRKFPFCKIHPSDDYPRSTMTFDNSTNIYPPEKNIS 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 97/487 (20%)
ASC 29..499 CDD:279230 97/487 (20%)
del-8NP_509617.2 ASC 38..452 CDD:279230 96/486 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162336
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.