DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk12 and mec-4

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_510712.2 Gene:mec-4 / 181728 WormBaseID:WBGene00003168 Length:768 Species:Caenorhabditis elegans


Alignment Length:672 Identity:116/672 - (17%)
Similarity:212/672 - (31%) Gaps:215/672 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RQFLNQTSLHGLKFVGDSGLSSWERSFFLGSFVTALIITVHLISNIYVKWDSTPVIIGISPQATS 91
            ::|..:||.||:..:|::. :.:.|:.::..|:..:|:......::..|::....|:.|.     
 Worm    85 KEFCYKTSAHGIPMIGEAP-NVYYRAVWVVLFLGCMIMLYLNAQSVLDKYNRNEKIVDIQ----- 143

  Fly    92 ILK---VPFPAITICNMNQVQRSLVANY---------------REGSN----------------- 121
             ||   .||||||:||:|..:.||..:.               :.|.|                 
 Worm   144 -LKFDTAPFPAITLCNLNPYKASLATSVDLVKRTLSAFDGAMGKAGGNKDHEEEREVVTEPPTTP 207

  Fly   122 --------------------ESALLKLLCESD-SWESSEADEEFSASNFVTNNLKI--------- 156
                                |....:.||.|. |.|..:.|||.......|...|:         
 Worm   208 APTTKPARRRGKRDLSGAFFEPGFARCLCGSQGSSEQEDKDEEKEEELLETTTKKVFNINDADEE 272

  Fly   157 ----SEFVSNHSQSCE-------RMLLFCR----------------FSAVERNCSQLFQQIL--- 191
                .|:.:.|.::.:       .|:..|:                ..|.:|:....:...|   
 Worm   273 WDGMEEYDNEHYENYDVEATTGMNMMEECQSERTKFDEPTGFDDRCICAFDRSTHDAWPCFLNGT 337

  Fly   192 --------------------TDEG-----------LCCVFNFQPP-----EYLYKPFANNNRNLT 220
                                |.:|           .|..:|.:.|     .||.......:.|..
 Worm   338 WETTECDTCNEHAFCTKDNKTAKGHRSPCICAPSRFCVAYNGKTPPIEIWTYLQGGTPTEDPNFL 402

  Fly   221 NSDGF--------------ESVMW-------------------------------DPESGYPEQL 240
            .:.||              |::|:                               |.|:.:...:
 Worm   403 EAMGFQGMTDEVAIVTKAKENIMFAMATLSMQDRERLSTTKRELVHKCSFNGKACDIEADFLTHI 467

  Fly   241 PPKFYPATASGTGITLGFTAVLDAEM----------GEYYCSSTNGPGFKVYFHNPIEVPKVKEA 295
            .|.|..........|:..|::....|          ...|..:|...|.::..|:..:.|.....
 Worm   468 DPAFGSCFTFNHNRTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTF 532

  Fly   296 GLISAIGYETNYRIEMVRAEAVPA-IRSISRDGR--QCLFKNEKELIFYRIYTRLNCENECLAAF 357
            |..:..||.:::.:.:.:...:|| ......||:  ..::.|.:       |:...|...|....
 Worm   533 GYSAPTGYVSSFGLRLRKMSRLPAPYGDCVPDGKTSDYIYSNYE-------YSVEGCYRSCFQQL 590

  Fly   358 LYDTCSCIPFDHPLIYSNASICSMGDTSCVRRAQRASNRPGW------AKCRQQCLPSCFDLNYL 416
            :...|.|.....| :..||..|...|....:......|..|.      .:|:|.|..|.:.:.| 
 Worm   591 VLKECRCGDPRFP-VPENARHCDAADPIARKCLDARMNDLGGLHGSFRCRCQQPCRQSIYSVTY- 653

  Fly   417 ASGFSFPLASNNFQL--ANALVESFNKSYLSKNIAVINVYFRESVYYGNTKNAYVGLTEFLSNVG 479
             |...:|..|...||  .|......||.| .:|.|::.|::.:..:...|::...|....|::.|
 Worm   654 -SPAKWPSLSLQIQLGSCNGTAVECNKHY-KENGAMVEVFYEQLNFEMLTESEAYGFVNLLADFG 716

  Fly   480 GVMGLFMGFSVISLAEILYFLI 501
            |.:||:.|.|.::..|.::..:
 Worm   717 GQLGLWCGISFLTCCEFVFLFL 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 116/667 (17%)
ASC 29..499 CDD:279230 116/666 (17%)
mec-4NP_510712.2 deg-1 86..736 CDD:273309 116/667 (17%)
ASC 87..>172 CDD:279230 25/91 (27%)
ASC <428..739 CDD:295594 59/322 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162327
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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