DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and flr-1

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_510243.1 Gene:flr-1 / 181468 WormBaseID:WBGene00001465 Length:638 Species:Caenorhabditis elegans


Alignment Length:621 Identity:131/621 - (21%)
Similarity:236/621 - (38%) Gaps:160/621 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TERQGSSLFLLKSFVRSLRQFLNQTSLHGLKFVGDSGLSSW-ERSFFLGSFVTALIITVHLISNI 72
            ||.:...:: |:.:....::|...|:.|||..:.:|  ::| .|.|::...::.|.:.:.....:
 Worm     3 TETESERIY-LQLYDYETKEFSGLTTYHGLVRIYNS--NTWPSRIFWVVVVLSCLSLFMIHSGYL 64

  Fly    73 YVKWDSTPVIIGISPQATSILKVP-----FPAITICNMNQVQRSLVANYREGSNESALLKLLCES 132
            .:.:.:.|.:.    |..:|  ||     ||.:||||:|.:            |.:.|.:|....
 Worm    65 LLGYHAKPTLF----QTNTI--VPMNGLLFPEVTICNLNPL------------NTTKLEELNISK 111

  Fly   133 DSW----------ESSE------ADEEFSASNFVTNN--------LKISEFVSNHSQSCERMLLF 173
            .:|          .:||      .:|:|..   :.||        ..:..|:.:.|:|||...:.
 Worm   112 STWTYIFGYFDEITTSEHKSTKLGEEQFLE---IMNNYQELTKQEFNVKNFLKSVSKSCEETFIS 173

  Fly   174 CRFSAVE-RNCSQLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYP 237
            |.|...: .||.:.....:|:.|:|              |..:|.|                   
 Worm   174 CSFGREKLHNCCEHVTTEMTEVGVC--------------FRLSNVN------------------- 205

  Fly   238 EQLPPKFYPATASGTGITLGFTAVLDA--EMGEYYCSSTNGP--GFKVYFHNPIEVPKVKEAGLI 298
                 |.|....||.|  .|:..||:.  |:.::..|....|  ||.:..|...:.||:...|:.
 Worm   206 -----KKYRQWYSGNG--FGWEFVLNGNNEIDDHADSLDFEPDRGFLIMVHESEKYPKINSYGVA 263

  Fly   299 SAIGYETNYRIEMVRAEAVPAIR--SISRDGRQCLFKNEKELIFYRIYTRLNCENECLAAFLYDT 361
            .:...:.:..|.|.....:....  |.|:...    :|:.::    .||..:||.:|....:.:.
 Worm   264 VSPDSQLHAAISMKNISLLDKANWGSCSKGWN----RNDTDV----PYTATHCEIDCKLRKVRNL 320

  Fly   362 CSCIPFDHPLIY------SNASICSMGD-TSCVRRAQRASNRPGW---AKCRQQCLPSCFDLNYL 416
            |.|    .||.|      ||.:||:... ..|.|:.:...||  |   ..|..:|....||:   
 Worm   321 CGC----SPLAYSARESGSNDTICTPYQIQQCFRKVRGLDNR--WEDECDCPSECNMLEFDV--- 376

  Fly   417 ASGFSFPLASNNFQLANALVESFNKSYLSKNIAVINVYFRESVYYGNTKNAYVGLTEFLSNVGGV 481
                     :|::...:......:.|.:..:|:.:::||....|....:...:...:.|||:.|.
 Worm   377 ---------TNSYSDLDGRSRGLSSSKVESDISHVSLYFSHVAYERIEQQKQLQTADLLSNIAGS 432

  Fly   482 MGLFMGFSVISLAEILYFLILKPLAELFVW------KRSSHVDS----EKSLKHNAFGIEKGQSS 536
            ||||:|.|.::|.||..:|...      ||      ::...||:    ||....:...|:.|::.
 Worm   433 MGLFLGMSTVTLLEIFIYLFKS------VWGTVNSTRQQQFVDAVAEEEKERSESIVIIQNGRND 491

  Fly   537 D----NPSFWHSKELYPKGVSISAY---ENAKSTKG 565
            |    .||.:...:....|.||..:   .|::..:|
 Worm   492 DMDDQKPSRFPGADRKLSGNSIHIHLDRRNSRMIRG 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 111/517 (21%)
ASC 29..499 CDD:279230 111/516 (22%)
flr-1NP_510243.1 ASC 22..450 CDD:279230 111/516 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.830

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