DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and del-10

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_495302.3 Gene:del-10 / 174069 WormBaseID:WBGene00020897 Length:1069 Species:Caenorhabditis elegans


Alignment Length:582 Identity:111/582 - (19%)
Similarity:188/582 - (32%) Gaps:176/582 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VRSLRQFL------NQTSLHGLKFVGDSGLSSWERSFFLGSFVTALIITVHLISNIYVKWDSTPV 81
            |.|.:|||      |..::|.|..........|  ...:.:||..:::..:....:|:   |.||
 Worm    65 VESDKQFLDAFKDANMDAVHHLNAASPVTRGLW--CMIIIAFVILVLVQCYSQIKLYI---SEPV 124

  Fly    82 IIGISPQATSILKVPFPAITICNMNQVQRSL-----VANYREGSNESALLKLLCESDSWESSEAD 141
            ...|..:..|  |:.||.:.|||.||.:.:.     :.|.|..|...:||.        ...:.:
 Worm   125 ATNIEAEYPS--KISFPTVAICNNNQFRLTYLTGGRIMNRRSKSISGSLLS--------TGHDVE 179

  Fly   142 EEFSASNFVTNNLKISEFVSNHSQSCERMLLFCRF-SAVERNCSQLFQQILTDEGLCCVFNFQPP 205
            ..|......:.::...:|:.:.:....||:|.|.: :......|. |:.:.|..|||...|..| 
 Worm   180 SVFDTVLRKSWDMDAVKFLRSAAHWKSRMILGCTWPNGTSCKLSD-FKAVWTTTGLCWAINTDP- 242

  Fly   206 EYLYKPFANNNRNLTNSDGFESVMWDPESGYPEQLPPKFYPATASGTGITLGFTAVLDAEMGEYY 270
               :.|                                 |..|.||.|  .|...:|:.|..|..
 Worm   243 ---HNP---------------------------------YEVTGSGEG--HGLRLLLNVESYERV 269

  Fly   271 CSSTNG------PGFKVYFHNPIEVPKVKEAGLISAIGYETNYRIEMVRAEAVPAIRSISRDGRQ 329
            .:.|..      ||.|:..:|..::|.....|:....||..:...:|.....:..:..|..:..|
 Worm   270 DACTKHFRTKTLPGLKILIYNQTDIPDSSMNGVNVPSGYSMDIPFKMQHRSKLTGVHCIEENDEQ 334

  Fly   330 CL----FKNEKEL---IFYRIYTRLNCENECLAAFLYDTCSCIPFDHPLIYSNAS-----ICSMG 382
            ..    |.|.:.:   ...|..|.:  ||.|       .|:.    .....||::     .|::.
 Worm   335 IEASTDFNNPENIRTCTLRRYMTEV--ENSC-------HCTL----RRAYTSNSTDVKMKACNVD 386

  Fly   383 D-TSCVRRAQRASNRPGWAKCRQQCLPSCFDLNYLASGFSFPLASNNFQLANALVE--------S 438
            . ..|.::|.:.....|.|   ..|||.|..::|.|......|..|   |..||:|        .
 Worm   387 QYFGCAQKAMQRIREEGTA---STCLPPCKSIDYTAWQDMNRLPQN---LMPALIEEQEEDDEDD 445

  Fly   439 FNKSYLSKNIAVINVYFRESVYYGNTKNAYVGLTEFLSNVGGVMGLFMGFSVISLAEILYFLILK 503
            ..:..|.:|::                         .|.|.|                       
 Worm   446 VEQEELDENVS-------------------------FSTVSG----------------------- 462

  Fly   504 PLAELFVWKRSSHVDSEKSLK-----HNAFGIEKGQSSDNPSFWHSKELYPKGVSISAYENA 560
              .|.|..:.|:::|.::.::     |.|:.::.....|  .|..|:.|      |:...||
 Worm   463 --GETFSCEDSAYLDDKQVMRIKRDAHRAYEMQARHQED--IFLRSRRL------IARLRNA 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 96/509 (19%)
ASC 29..499 CDD:279230 95/508 (19%)
del-10NP_495302.3 ASC 83..>419 CDD:279230 80/406 (20%)
ASC <789..849 CDD:279230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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