DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and Asic3

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_006535700.1 Gene:Asic3 / 171209 MGIID:2159339 Length:563 Species:Mus musculus


Alignment Length:598 Identity:134/598 - (22%)
Similarity:219/598 - (36%) Gaps:178/598 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PSAGTE----RQGSSLFLLKSFVRSLRQFLNQTSLHGLKFV-GDSGLSSWERSFFLGSFVTALII 64
            |.:|.|    ||.|          .:|.|.|..::|||..: |..||     :...|.:.||:::
Mouse     3 PPSGLEEAQRRQAS----------DIRVFANSCTMHGLGHIFGPGGL-----TLRRGLWATAVLL 52

  Fly    65 TVHLISNIY-----VKW-----DSTPVIIGISPQATSILKVPFPAITICNMNQVQRS-LVANYRE 118
            :  |.:.:|     |::     ..|.:....|.|.|      |||:|:||:|.::|| |..|...
Mouse    53 S--LAAFLYQVAERVRYYGEFHHKTTLDERESHQLT------FPAVTLCNINPLRRSRLTPNDLH 109

  Fly   119 GSNESALLKLLCESDSWESS---------EADEEFSASNFVTNNLKISEFVSNHSQSCERMLLFC 174
            .:. :|||.|    |..|.:         .|...|..|    ....:::..:....|.|.|||.|
Mouse   110 WAG-TALLGL----DPAEHAAYLRALGQPPAPPGFMPS----PTFDMAQLYARAGHSLEDMLLDC 165

  Fly   175 RFSAVERNCS-QLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYPE 238
            |:..  :.|. :.|..|.|..|.|..||                  :.:.|.| ::..|:.|   
Mouse   166 RYRG--QPCGPENFTVIFTRMGQCYTFN------------------SGAQGAE-LLTTPKGG--- 206

  Fly   239 QLPPKFYPATASGTGITLGFTAVLDAEMGEY---YCSSTNGP---GFKVYFHNPIEVPKVKEAGL 297
                       :|.|:.:    :||.:..||   :......|   |.:|..|...|.|.:.:.|.
Mouse   207 -----------AGNGLEI----MLDVQQEEYLPIWKDMEETPFEVGIRVQIHGQEEPPAIDQLGF 256

  Fly   298 ISAIGYETNYRIEMVRAEAVPA------IRSISRDGRQCLFKNEK-----ELIFYRIYTRLNCEN 351
            .:|.|::|....:..:...:|.      ..|:..|     |..|.     .......|:.:.|..
Mouse   257 GAAPGHQTFVSCQQQQLSFLPPPWGDCNTASVDPD-----FDPEPSDPLGSPSSSPPYSLIGCRL 316

  Fly   352 ECLAAFLYDTCSCIPFDHPLIYSNASICSMGDTSCVRRAQRASNRPGWAKCRQQCLP----SCFD 412
            .|.:.::...|.|.....|   .|:.:||       .:..:....|...|.....||    |..|
Mouse   317 ACESRYVARKCGCRMMHMP---GNSPVCS-------PQQYKDCASPALGKAHLFSLPVPIHSDID 371

  Fly   413 LNYLASGFSF-------------------PLASNNF------------QLANALVESFNKS--YL 444
            .|.|.....|                   |.|:..:            ..|..|...:|:|  |:
Mouse   372 HNPLGQVLLFLALRPADAMLRKDTCVCPNPCATTRYAKELSMVRIPSRASARYLARKYNRSETYI 436

  Fly   445 SKNIAVINVYFRESVYYGNTKNAYVGLTEFLSNVGGVMGLFMGFSVISLAEILYFLILKPLAELF 509
            ::|:.|::::|....|....:.|...::|.|.::||.||||:|.|::::.|||.:     |.|:|
Mouse   437 TENVLVLDIFFEALNYEAVEQKAAYEVSELLGDIGGQMGLFIGASLLTILEILDY-----LCEVF 496

  Fly   510 -------VWKRSS 515
                   .|.|.|
Mouse   497 QDRVLGYFWNRRS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 121/546 (22%)
ASC 29..499 CDD:279230 121/545 (22%)
Asic3XP_006535700.1 ASC 21..546 CDD:383197 127/570 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842233
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8693
orthoMCL 1 0.900 - - OOG6_100105
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.750

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