DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and scnn1gl

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_017947701.2 Gene:scnn1gl / 101734161 XenbaseID:XB-GENE-22061126 Length:481 Species:Xenopus tropicalis


Alignment Length:530 Identity:120/530 - (22%)
Similarity:203/530 - (38%) Gaps:142/530 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 KVPFPAITICNMNQVQRSLVANYREGSNESALLKLLCESDSWESSEADEEFSASN-------FVT 151
            ::||||||.||:|:.:.|.:        .|:..:.|.|..|:.|....||.|.|:       |..
 Frog    28 RLPFPAITFCNLNRARMSKL--------NSSKYQSLTEYLSFTSGNESEEGSISHGRDRNFTFAL 84

  Fly   152 NNLKISEFVSNHSQSCERMLLFCRFSAVERNCSQ-LFQQILTDE-GLCCVF------------NF 202
            :.|...|.:....| .|.||:.|.|.  :..|:: .|...|..: |:|..|            |:
 Frog    85 SQLTPQEQMELGHQ-LENMLISCIFH--DEVCNESFFTPFLNPKLGICYTFNGRRQADLQHWQNY 146

  Fly   203 QPPEYLYKPFANNNRNLTNSDGFESVMWDPESGYPEQLPPKFYPATASGTGITLGFTAVLDAEMG 267
            |..|||                                       .|:..|.:.|.|..|..|..
 Frog   147 QQEEYL---------------------------------------NATKAGFSYGLTMELFIEQS 172

  Fly   268 EYYCSSTNGPGFKVYFHNPIEVPKVKEAGLISAIGYETNYRIEMVRAEAVPA-----------IR 321
            ||..|.:...|.:|..|...::|..::.|:....|.|::..|..|..:.:..           ||
 Frog   173 EYISSLSTTAGLRVVLHGQGKMPFPEDEGVNVPPGQESDIGIVKVHVKRLQEPYSSKCSNGNDIR 237

  Fly   322 SISRDGRQCLFKNEKELIFYRIYTRLNCENECLAAFLYDTCSCIPFDHP-LIYSNASICSMGDTS 385
            :...|            ::...|:|..|:..|..|.:...|.|..::.| ...||..:|::.:.|
 Frog   238 NFYTD------------VYGTDYSRETCKKSCAQAKMIKNCGCRMWEFPEPPGSNVPLCNISEPS 290

  Fly   386 ---CVRRAQ-RASNRPGWAKCRQQCLPSCFDLNYLASGFSFPLASNNFQLANALVESFNKSYLSK 446
               ||...: :.|:......|..||....|:|.         |:|:.:. ::..::||.|...|:
 Frog   291 VNHCVEMYEYKLSHDQLKCHCPLQCEEEIFELT---------LSSSQWP-SSMYLDSFTKRLQSR 345

  Fly   447 -----------NIAVINVYFRESVYYGNTKNAYVGLTEFLSNVGGVMGLFMGFSVISLAEILYFL 500
                       |:..:.||:::..|....:...:.|.:..|::||::||::|.||.::||.|. |
 Frog   346 KGFQSAQSIRDNVVKVVVYYQQLNYELIEEVPSMQLVDLFSSIGGLVGLWIGVSVCTVAEFLE-L 409

  Fly   501 ILKPLAELFVWKRSSHVDSEKSLK---------HNAFGIEKGQSSDNPSFWHSKELYPKGVSISA 556
            ||..|.  ||.::.|:.:.|....         .:.|..|..||      |.|.:    .||...
 Frog   410 ILNLLT--FVIRQISNQEEESPANPYTIPGPEVQSPFSAEHCQS------WTSVD----DVSCLL 462

  Fly   557 YENAKSTKGL 566
            ..|::|::.:
 Frog   463 GNNSESSQNM 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 102/452 (23%)
ASC 29..499 CDD:279230 102/452 (23%)
scnn1glXP_017947701.2 ASC 1..450 CDD:413546 112/496 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.