DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk12 and scnn1g

DIOPT Version :9

Sequence 1:NP_611672.1 Gene:ppk12 / 37566 FlyBaseID:FBgn0034730 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_031749443.1 Gene:scnn1g / 100487822 XenbaseID:XB-GENE-980897 Length:672 Species:Xenopus tropicalis


Alignment Length:624 Identity:116/624 - (18%)
Similarity:207/624 - (33%) Gaps:207/624 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TERQGSSLFLLKSFVRSLRQFLNQTSLHGLK--FVGDSGLSSWERSFFLGSFVTALIITVHLISN 71
            |..|..:|:.|      ::.:...|:.||.:  .|....|..|          ..:::|:..::.
 Frog    29 TGPQAPTLYEL------MQWYCLNTNTHGCRRIVVSKGRLRRW----------IWIVLTLCAVAL 77

  Fly    72 IYVKWDSTPVIIGISPQATSIL----KVPFPAITICNMN-----QVQRSLVANYREGSNESALLK 127
            |:  |....:::.....:.||.    |:.|||:||||:|     :::..|.|..||.|  ..|..
 Frog    78 IF--WQCALLLMSYYSVSASITVTFQKLVFPAVTICNLNPYSYSKIKDRLSALERETS--QTLKN 138

  Fly   128 LLCESDSWESSEAD---EEFSASNFVT------------NNLKISEFVS---------------- 161
            :...::....|:.|   :|.|...|:.            |.|.:|:..:                
 Frog   139 IYGFTEPLVRSKRDVEVDENSTDIFIKQIPLYRLESVQGNQLVVSDLKTKKRTRMSAKVIHRDAE 203

  Fly   162 ----------------NHSQSC---------------------------------------ERML 171
                            |:|..|                                       :.::
 Frog   204 SVQDPGNMVGFKLCDPNNSSDCTIFTFSSGVNAIQEWYRLHYTNVLAKISMEDKIAMGYKADELI 268

  Fly   172 LFCRFSAVE---RNCSQLFQQILTDEGLCCVFNFQPPEYLYKPFANNNRNLTNSDGFESVMWDPE 233
            :.|.|..:.   ||.: ||...|  .|.|..||          .|.....|.:|.|         
 Frog   269 VTCFFDGLSCDARNFT-LFHHPL--YGNCYTFN----------SAERGNLLVSSMG--------- 311

  Fly   234 SGYPEQLPPKFYPATASGTGITLGFTAVLDAEMGEYYCSSTNGPGFKVYFHNPIEVPKVKEAGLI 298
                               |...|...||..:..||....:...|.|:..|:..|.|.:::.|..
 Frog   312 -------------------GAEYGLKVVLYIDEDEYNPYLSTAAGAKILVHDQDEYPFIEDLGTE 357

  Fly   299 SAIGYETNYRIEMVRAEAV-PAIRSISRDGRQCLFKNEKELIFYRIYTRLNCENECLAAFLYDTC 362
            .....||:..:::..:..: ......:.||.....:|    ::.:.||...|.|.|....:..||
 Frog   358 LETATETSIGMQLTESTKLSDPYSDCTMDGSDVSVEN----LYSKKYTLQICLNSCFQREMVRTC 418

  Fly   363 SCIPFDHPLIYSNASICSMGDTSCVRRAQRASNRPGW---------------AKCRQQCLPSCF- 411
            .|..:|.|| .:.|..|:.            ...|.|               ..|:..|..||. 
 Frog   419 GCAHYDQPL-PNGAKYCNY------------EEYPSWIYCYFKLYKQFVQEELGCQSACRESCSF 470

  Fly   412 -DLNYLASGFSFP-LASNNFQ---LANALVESFNKSYLSKNIAVINVYFRESVYYGNTKNAYVGL 471
             :.....|...:| |.|..:.   |:..|.|..||:....::|.:|:::::......:::....:
 Frog   471 KEWTLTRSLAKWPSLNSEQWMLRVLSWELGEKLNKNLTKNDLANLNIFYQDLNSRSISESPTYNI 535

  Fly   472 TEFLSNVGGVMGLFMGFSVISLAEIL-------YFLILK 503
            ...|||.||.:||:|..|:|.:.||:       ::::|:
 Frog   536 VTLLSNFGGQLGLWMSCSMICVLEIVEVFFIDSFWVVLR 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk12NP_611672.1 deg-1 28..499 CDD:273309 111/599 (19%)
ASC 29..499 CDD:279230 111/598 (19%)
scnn1gXP_031749443.1 ENaC 35..651 CDD:273304 114/618 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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