DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10344 and swf1

DIOPT Version :10

Sequence 1:NP_611671.1 Gene:CG10344 / 37565 FlyBaseID:FBgn0034729 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_596556.1 Gene:swf1 / 2539719 PomBaseID:SPBC13G1.07 Length:356 Species:Schizosaccharomyces pombe


Alignment Length:296 Identity:68/296 - (22%)
Similarity:105/296 - (35%) Gaps:93/296 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VVFMFEIVVVLPAFHEPGGFFHTFTFLMAMFLVFNIKGNMIACMMIDTSVNVKKVEPPS--DQLN 89
            |||::..::.:..    ..||...:.|...|.:.:....:.:.::...|:.:.....|.  |..|
pombe    80 VVFLYLALITIGI----ASFFIYGSSLTQKFSIIDWISVLTSVLLPYISLYIAAKSNPGKIDLKN 140

  Fly    90 WRE----------------CGECQKLAPPRSWHCKACKVCILKRDHHCIYTGCCIGLRNHRFFMG 138
            |.|                |..|:...|.||.||:.|.:|:.|.|||||:...|:||.|.|:   
pombe   141 WNEASRRFPYDYKIFFPNKCSTCKFEKPARSKHCRLCNICVEKFDHHCIWINNCVGLNNARY--- 202

  Fly   139 FIFYLFVGSVYALVYNSIYMWVIH-----------GHIYSNW-----------VTVLKLACPML- 180
              |:||:.....|:::||.....|           ..:.|.|           |.::.|.|.:| 
pombe   203 --FFLFLLCTIQLLFHSILRLGYHFNALRDMRQYPSFLRSWWFAIKSEGELGSVFLISLICSVLV 265

  Fly   181 --------HLVTGSFWTN----------------MYLVFYSLNILALAYGVLLLAYHVPIVLRGG 221
                    .||...:.||                :|:.:.:        |..|||      |...
pombe   266 LCLLGYEFFLVYAGYTTNESEKWSDLAHLVKNRKVYMYYEN--------GSQLLA------LDKD 316

  Fly   222 VSADR---TKESK--EKYDRGVYQNLRSVFGNRMHL 252
            .|.|.   |..|:  ..||.|.|.|..|:.....||
pombe   317 ASNDAILVTSMSQIDNIYDNGFYNNFFSLVFPYRHL 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10344NP_611671.1 DHHC 93..220 CDD:396215 43/173 (25%)
swf1NP_596556.1 COG5273 47..356 CDD:227598 68/296 (23%)

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