DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS29 and AT1G16870

DIOPT Version :9

Sequence 1:NP_523811.1 Gene:mRpS29 / 37563 FlyBaseID:FBgn0034727 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_173131.1 Gene:AT1G16870 / 838258 AraportID:AT1G16870 Length:480 Species:Arabidopsis thaliana


Alignment Length:358 Identity:72/358 - (20%)
Similarity:119/358 - (33%) Gaps:98/358 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GLPKQYEQQIKTFTEACLMVRNPALELLQYIK----------DGDLTKPVVRYVLYGENGTGKTL 130
            ||....|.:........|:||...|.|....:          |....|...:.||.|....||::
plant   157 GLASGIEDEFNESWRPALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSI 221

  Fly   131 TMAHVLHYGALNDFLLVHVPWAPNW------MKRPKEASNAAGQEGMIDLPFDAAAWLVHFKTQN 189
            .:|.::|:.....:|:::.|...:|      .|.|        ..|..|.|..|...|..|...|
plant   222 ALAMLVHWARDEGWLVLYAPKGRDWTHGGYFYKNP--------HTGFWDTPLQAENILKDFVKFN 278

  Fly   190 GPLLQRLQLKTSKEYVWSKREST-----------PAGSSLIELVEHGIARIKYASETTAALIAEL 243
            ...|:.|:.|.....|..:....           |..|:|.:||:.|   ||........::...
plant   279 ESRLRELRCKIHDPIVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMG---IKSTHAAVNVVVRLR 340

  Fly   244 KQLSTAGQCKVMVAIDGFNAFFHPVTRIFSDNKQLVTP--------DRVTLTQPFLDITNYDWTN 300
            |:||......|::.||.:|::|     .||:.::.|||        ..:|....|..:.:.|...
plant   341 KELSVVKDVPVLIVIDQYNSWF-----TFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMV 400

  Fly   301 GVCILSVDKIAMTEGHMDSYMPRYLLGKEGFEHLD---------PFVPIHVE----NYTDKEFHS 352
            |                            .|.|..         |.||:...    .|:..|..:
plant   401 G----------------------------AFSHSTAVGKLRKDLPDVPVDARQQFPRYSLDEAEA 437

  Fly   353 YISYYLDRHWINKTPQGFEEQ----LKFMSNKN 381
            ...|||.:..:.:  :.|.|:    :.:::|.|
plant   438 VCYYYLRQRLVRR--EVFNEENWKKIYYLANGN 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS29NP_523811.1 DAP3 93..388 CDD:287238 69/341 (20%)
AT1G16870NP_173131.1 DAP3 174..472 CDD:370907 69/341 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 43 1.000 Domainoid score I4759
eggNOG 1 0.900 - - E1_KOG3928
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593937at2759
OrthoFinder 1 1.000 - - FOG0006045
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12810
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

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