DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS29 and dap3

DIOPT Version :9

Sequence 1:NP_523811.1 Gene:mRpS29 / 37563 FlyBaseID:FBgn0034727 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_001016002.1 Gene:dap3 / 548756 XenbaseID:XB-GENE-997724 Length:394 Species:Xenopus tropicalis


Alignment Length:362 Identity:150/362 - (41%)
Similarity:226/362 - (62%) Gaps:9/362 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NAAASPAEGATISEFRTAVSNPGEHSAMQVAKFYTIPAEQKKQIFTGGGLPKQYEQQIKTFTEAC 92
            ::|.|||:.|....|||:.::||.|:.....:||::.|:..:..|. .|||.:::||.|||.|.|
 Frog    31 SSALSPAQDAPREVFRTSETDPGAHTEQHEGQFYSLSAQDVRAAFP-QGLPWRFQQQSKTFNETC 94

  Fly    93 LMVRNPALELLQYIKDGDLTKPVVRYVLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMK 157
            :|||.||:|||:|:::.|.|:|.|||||||:.||||:||:.|::||.....:||:.||.|...:|
 Frog    95 VMVRRPAIELLRYLRNSDPTQPAVRYVLYGKRGTGKSLTLCHIVHYCHTQGWLLLQVPDAHVLVK 159

  Fly   158 RPKEASNAAGQEGMIDLPFDAAAWLVHFKTQNGPLLQRLQLKTSKEYVWSKRESTPAGSSLIELV 222
            ..||...::......|.|.:|:.||.:||..|...|:  |::|::.|||||||:|..|..|.|:|
 Frog   160 NCKELMPSSFHSNRFDQPLEASNWLKNFKATNEHFLK--QIRTNQRYVWSKREATDEGRPLGEVV 222

  Fly   223 EHGIARIKYASETTAALIAELKQLSTAGQCKVMVAIDGFNAFFHPVTRIFSDNKQLVTPDRVTLT 287
            :.|:.|:|.||:....::.|||:.|..|..:::|::||.||.:...| |..::|.||.|:.:||.
 Frog   223 DQGLTRVKSASDAVGVVLKELKRQSGGGAYQMLVSVDGVNALWGRST-IRKEDKSLVPPEELTLV 286

  Fly   288 QPFLDITNYDWTNGVCILSVDKIAMTEGHMDSYMPRYLLGKEGFEHLDPFVPIHVENYTDKEFHS 352
            .....:...|||.|..:|:|.:.........:|:|.:|||||||:.|||||||.|.||.:|||.|
 Frog   287 HNLRKMVQNDWTGGAIVLTVTQAGSLYTPACAYLPHHLLGKEGFDALDPFVPIQVPNYNEKEFES 351

  Fly   353 YISYYLDRHWIN----KTPQGFEEQLKFMSNKNPYSL 385
            ...|||:|.|:.    .||:| :.:|:|:|:.||..|
 Frog   352 CYQYYLERKWLQHHKAHTPEG-KAELRFLSDSNPKQL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS29NP_523811.1 DAP3 93..388 CDD:287238 125/297 (42%)
dap3NP_001016002.1 DAP3 95..389 CDD:287238 125/297 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 240 1.000 Domainoid score I2227
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3404
Inparanoid 1 1.050 286 1.000 Inparanoid score I2784
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593937at2759
OrthoFinder 1 1.000 - - FOG0006045
OrthoInspector 1 1.000 - - oto104755
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4955
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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