DRSC/TRiP Functional Genomics Resources

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Protein Alignment qkr58E-2 and khdrbs2

DIOPT Version :9

Sequence 1:NP_001286724.1 Gene:qkr58E-2 / 37562 FlyBaseID:FBgn0022985 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001072215.1 Gene:khdrbs2 / 779662 XenbaseID:XB-GENE-490722 Length:345 Species:Xenopus tropicalis


Alignment Length:349 Identity:115/349 - (32%)
Similarity:172/349 - (49%) Gaps:72/349 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QKYMQELMTERSRMENHFPLAVKLIDEALERVQ--LNGRIPTRDQYADVYQQRTIKLSQKVHVPI 136
            :||:.|||.|:..::..|..|::|:||.:.:.|  ...:.....:|.|:...:.||||::|.:|:
 Frog     4 EKYLPELMAEKDSLDPSFVHAMRLLDEEIVKFQDSEGNKEDGEKKYLDIISNKNIKLSERVLIPV 68

  Fly   137 KD-KKFNYVGKLLGPKGNSLRRLQEETQCKIVILGRFSMKDRAREEELRNSADAKYAHLNLPLHV 200
            |. .|||:|||||||:||||:||||||..|:.|||:.||:|:.:|||||.|.:||:|||:..|||
 Frog    69 KQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHLSDELHV 133

  Fly   201 EVSTIAPPAEAYARVAYALAEIRRYLTPDKHDDIRQEQYREL-----MEDPEAAKKLTLRQLQQQ 260
            .:...|||.|||:|:::||.||:::|.||.:|:|||||.|||     .:|.|..|....|.::..
 Frog   134 LLEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSDDSERGKGTRGRGIRVP 198

  Fly   261 SNAAASGAGGGGGGGGGNGNGGAAGS--------------------------------------- 286
            |..:.:..|.......|.|.....|:                                       
 Frog   199 STPSRNRGGVISPAFPGRGASATRGAPITRGTISTVARGIPTPRAKAAPTTPGYRLPPPLTIETY 263

  Fly   287 ---GSNNGNG---NQRS----GGNYRQKFQQQSHYRHNEETVYFRSHNNAYHQPKPYVPAAQRGN 341
               |.::|.|   :::|    ..||..:.|..|.|...|......|:|: |.|        :..:
 Frog   264 DDYGYDDGFGEDYDEQSYDIYENNYNSQTQSVSEYYDYEHGTNEESYNH-YEQ--------EEWS 319

  Fly   342 AMHTTL------PPQAIVRASPPG 359
            ...:||      |.:|..|..|.|
 Frog   320 KSRSTLKAPLQRPARAGYREHPYG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qkr58E-2NP_001286724.1 SF1_like-KH 129..244 CDD:239088 68/120 (57%)
khdrbs2NP_001072215.1 Qua1 5..57 CDD:374463 14/51 (27%)
SF1_like-KH 61..180 CDD:239088 68/118 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..224 8/45 (18%)
Sam68-YY 263..317 CDD:374636 14/62 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..345 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012406at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9347
Panther 1 1.100 - - O PTHR11208
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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